About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_43775-0.0
Bpl_scaf_43775-0.7
Bpl_scaf_43775-0.8
Bpl_scaf_43775-1.1
Bpl_scaf_43775-1.13
Bpl_scaf_43775-1.14
Bpl_scaf_43775-1.16
Bpl_scaf_43789-0.4CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Bpl_scaf_43789-1.10
Bpl_scaf_43789-1.8GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
Bpl_scaf_43789-1.9GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
Bpl_scaf_43795-0.0
Bpl_scaf_43796-0.1UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
Bpl_scaf_43796-0.12TOLL-LIKE RECEPTOR
Bpl_scaf_43796-1.0GTPASE, IMAP FAMILY MEMBER-RELATED
Bpl_scaf_43796-1.10
Bpl_scaf_43796-1.26
Bpl_scaf_43796-1.27TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Bpl_scaf_43796-1.9
Bpl_scaf_43803-0.2
Bpl_scaf_43807-0.13
Bpl_scaf_43807-0.14
Bpl_scaf_43807-1.44
Bpl_scaf_43807-1.46
Bpl_scaf_43807-1.55MITOCHONDRIA-EATING PROTEIN-RELATED
Bpl_scaf_43807-1.57
Bpl_scaf_43807-1.58
Bpl_scaf_43807-1.59
Bpl_scaf_43807-1.60
Bpl_scaf_43807-1.62
Bpl_scaf_43813-1.0
Bpl_scaf_43813-1.4BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_43813-1.7BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_43813-2.1
Bpl_scaf_43813-2.18
Bpl_scaf_43813-2.2
Bpl_scaf_43813-2.3BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_43823-0.21
Bpl_scaf_43823-0.22
Bpl_scaf_43823-0.24
Bpl_scaf_43823-0.25
Bpl_scaf_43823-0.26
Bpl_scaf_43823-0.27
Bpl_scaf_43823-0.7
Bpl_scaf_43823-2.10OXIDASE/PEROXIDASE
Bpl_scaf_43823-2.11PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP7/14
Bpl_scaf_43823-2.8UBIQUITIN-ACTIVATING ENZYME E1
Bpl_scaf_43823-2.9DED DOMAIN-CONTAINING PROTEIN
Bpl_scaf_43826-2.6
Bpl_scaf_43829-0.0
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