About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_43952-6.12ALANYL-TRNA SYNTHETASE
Bpl_scaf_43952-6.13NULP1-RELATED
Bpl_scaf_43952-7.13GLUCOSE-6-PHOSPHATE ISOMERASE
Bpl_scaf_43952-7.14BTB/POZ DOMAIN-CONTAINING PROTEIN 9
Bpl_scaf_43952-7.17D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH
Bpl_scaf_43952-7.29
Bpl_scaf_43952-7.33TWISTED GASTRULATION PROTEIN HOMOLOG 1-A-RELATED
Bpl_scaf_43952-7.7
Bpl_scaf_43957-0.0COLLAGEN ALPHA
Bpl_scaf_43958-0.0
Bpl_scaf_43959-0.1
Bpl_scaf_43962-0.4
Bpl_scaf_43962-0.5
Bpl_scaf_43962-2.10PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17
Bpl_scaf_43962-2.3130S RIBOSOMAL PROTEIN S14
Bpl_scaf_43962-2.9TRANSLATION FACTOR
Bpl_scaf_43962-3.0
Bpl_scaf_43966-0.2PIKACHURIN-LIKE PROTEIN
Bpl_scaf_43967-0.21-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE
Bpl_scaf_43968-0.0
Bpl_scaf_43972-0.14
Bpl_scaf_43972-0.9
Bpl_scaf_43972-1.0
Bpl_scaf_43972-1.10BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER
Bpl_scaf_43972-1.5
Bpl_scaf_43972-1.8
Bpl_scaf_43972-2.14
Bpl_scaf_43972-2.18
Bpl_scaf_43972-2.19
Bpl_scaf_43972-2.8
Bpl_scaf_43972-3.11DNAJ HOMOLOG SUBFAMILY C MEMBER 1
Bpl_scaf_43972-3.12KINETOCHORE PROTEIN SPC25-RELATED
Bpl_scaf_43972-3.13CITRATE SYNTHASE
Bpl_scaf_43972-3.22ENDORIBONUCLEASE YBEY, CHLOROPLASTIC
Bpl_scaf_43972-3.4
Bpl_scaf_43974-0.4CALCIUM BINDING PROTEINS
Bpl_scaf_43975-0.4GLUTAREDOXIN FAMILY MEMBER
Bpl_scaf_43976-0.2
Bpl_scaf_43977-0.5
Bpl_scaf_43978-0.2
Bpl_scaf_43983-0.3
Bpl_scaf_43983-1.2UNCHARACTERIZED
Bpl_scaf_43983-2.31FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_43983-2.8FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_43983-3.12
Bpl_scaf_43983-3.17
Bpl_scaf_43983-3.19SOLUTE CARRIER FAMILY 13 MEMBER
Bpl_scaf_43983-3.4
Bpl_scaf_43984-0.0
Bpl_scaf_43984-0.1
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