About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_43466-4.6BAT4 PROTEIN-RELATED
Bpl_scaf_43466-5.0
Bpl_scaf_43466-5.11PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE
Bpl_scaf_43466-5.12LD22376P
Bpl_scaf_43466-5.13LD22376P
Bpl_scaf_43467-0.0
Bpl_scaf_43467-0.5TUMOR ENDOTHELIAL MARKER 7 RELATED
Bpl_scaf_4348-0.1
Bpl_scaf_43487-0.0C-TYPE LECTIN DOMAIN FAMILY 12 MEMBER A-RELATED
Bpl_scaf_43496-0.0
Bpl_scaf_43496-0.2ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
Bpl_scaf_43496-0.6
Bpl_scaf_43503-0.11
Bpl_scaf_43503-0.8PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5
Bpl_scaf_43516-0.15
Bpl_scaf_43516-0.17SIDESTEP PROTEIN
Bpl_scaf_43516-0.18INTERFERON-INDUCIBLE GTPASE
Bpl_scaf_43516-0.6
Bpl_scaf_43550-0.142-5 OLIGOADENYLATE SYNTHETASE
Bpl_scaf_43550-0.18
Bpl_scaf_43550-0.6
Bpl_scaf_43561-0.7LIPOXYGENASE
Bpl_scaf_43561-0.9PROTEIN CBG12474
Bpl_scaf_43572-0.15CORE-BINDING FACTOR, BETA SUBUNIT
Bpl_scaf_43572-0.7KATANIN P80 SUBUNIT
Bpl_scaf_43573-0.0
Bpl_scaf_43573-0.2SIDESTEP PROTEIN
Bpl_scaf_43573-0.9
Bpl_scaf_43573-2.5
Bpl_scaf_43573-4.8ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Bpl_scaf_43573-4.9RETICULOCALBIN
Bpl_scaf_43573-5.24GUANYLYL CYCLASE
Bpl_scaf_43573-5.26REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN
Bpl_scaf_43573-5.28REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN
Bpl_scaf_43573-5.9STEROL DESATURASE
Bpl_scaf_43577-0.11
Bpl_scaf_43577-0.15
Bpl_scaf_43577-0.16
Bpl_scaf_43577-0.17
Bpl_scaf_43584-0.4MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_43590-0.25RHO FAMILY GTPASE
Bpl_scaf_43590-0.27DEATH DOMAIN-CONTAINING PROTEIN CRADD
Bpl_scaf_43590-0.28RHO FAMILY GTPASE
Bpl_scaf_436-0.1UNC-93 RELATED
Bpl_scaf_436-0.6
Bpl_scaf_43601-0.13PROTEIN SIDEKICK
Bpl_scaf_43609-0.0
Bpl_scaf_43609-0.11DEATH DOMAIN-CONTAINING PROTEIN
Bpl_scaf_43610-0.0
Bpl_scaf_43610-0.28
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