About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_4383-0.2
Bpl_scaf_4383-0.5FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_43836-0.4CENTROMERE PROTEIN C
Bpl_scaf_43836-1.10SERINE/THREONINE PROTEIN KINASE
Bpl_scaf_43836-1.11GOLGIN- RELATED
Bpl_scaf_43836-1.14
Bpl_scaf_43836-2.1NEUROLIGIN
Bpl_scaf_43836-2.4
Bpl_scaf_43841-0.1
Bpl_scaf_43847-1.12
Bpl_scaf_43847-1.14BEIGE/BEACH-RELATED
Bpl_scaf_43849-0.0
Bpl_scaf_43849-0.3REVERSE TRANSCRIPTASES
Bpl_scaf_43856-0.0FORKHEAD BOX PROTEIN O
Bpl_scaf_43856-0.1FORKHEAD BOX PROTEIN O
Bpl_scaf_43856-1.2RETINOL DEHYDROGENASE
Bpl_scaf_43856-1.3RETINOL DEHYDROGENASE
Bpl_scaf_43856-2.0
Bpl_scaf_43856-2.10
Bpl_scaf_43856-2.7
Bpl_scaf_43856-2.8
Bpl_scaf_43857-0.0
Bpl_scaf_43860-0.0
Bpl_scaf_43861-0.0
Bpl_scaf_43867-0.6PYRAZINAMIDASE/NICOTINAMIDASE
Bpl_scaf_43867-0.7BONUS, ISOFORM C-RELATED
Bpl_scaf_43867-1.5MITOCHONDRIA-EATING PROTEIN-RELATED
Bpl_scaf_43867-2.13
Bpl_scaf_43867-2.14
Bpl_scaf_43867-2.2
Bpl_scaf_43867-2.8TOLL-LIKE RECEPTOR
Bpl_scaf_439-0.6GUANYL-NUCLEOTIDE EXCHANGE FACTOR
Bpl_scaf_43951-0.5RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT
Bpl_scaf_43951-1.13
Bpl_scaf_43951-1.14
Bpl_scaf_43951-1.16
Bpl_scaf_43952-0.0
Bpl_scaf_43952-1.5INSULIN-INDUCED GENE 1
Bpl_scaf_43952-1.8
Bpl_scaf_43952-1.9
Bpl_scaf_43952-2.12
Bpl_scaf_43952-2.14
Bpl_scaf_43952-2.7
Bpl_scaf_43952-2.9POU DOMAIN
Bpl_scaf_43952-3.4
Bpl_scaf_43952-4.3MOLTING PROTEIN MLT-4
Bpl_scaf_43952-4.9ATP-BINDING CASSETTE, SUB-FAMILY H, MEMBER 1
Bpl_scaf_43952-5.3OTU DOMAIN CONTAINING PROTEIN
Bpl_scaf_43952-5.4BONUS, ISOFORM C-RELATED
Bpl_scaf_43952-5.7TRANSMEMBRANE PROTEIN 192
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