About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_44395-0.22
Bpl_scaf_44395-0.24SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_44395-0.9
Bpl_scaf_44410-0.21TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_44410-0.22TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_44410-0.3TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_44426-0.1MATRIX METALLOPROTEINASE
Bpl_scaf_44426-0.2MATRIX METALLOPROTEINASE
Bpl_scaf_44426-0.7
Bpl_scaf_44426-1.0CHYMOTRYPSIN-RELATED
Bpl_scaf_44426-1.20CHYMOTRYPSIN-RELATED
Bpl_scaf_44426-1.21CHYMOTRYPSIN-RELATED
Bpl_scaf_44427-0.2SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Bpl_scaf_44427-0.4DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_44427-1.4PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_44427-2.4GLYCEROL-3-PHOSPHATE DEHYDROGENASE
Bpl_scaf_44427-2.6B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Bpl_scaf_44427-2.7THYROTROPIN-RELEASING HORMONE RECEPTOR
Bpl_scaf_44427-3.10F-BOX ONLY PROTEIN 22
Bpl_scaf_44427-3.11
Bpl_scaf_44427-3.9DNA REPAIR PROTEIN REV1
Bpl_scaf_44427-4.10UBIQUITIN THIOESTERASE
Bpl_scaf_44427-4.16
Bpl_scaf_44427-4.8ZINC FINGER PROTEIN 142
Bpl_scaf_44427-5.21UNCHARACTERIZED
Bpl_scaf_44427-5.4ALKALI-SENSITIVE LINKAGE PROTEIN 1
Bpl_scaf_44427-5.5ALKALI-SENSITIVE LINKAGE PROTEIN 1
Bpl_scaf_44427-6.2
Bpl_scaf_44427-6.22BCL-2 RELATED
Bpl_scaf_44427-6.3LATROPHILIN RECEPTOR-LIKE PROTEIN A
Bpl_scaf_44427-6.8ARRESTIN DOMAIN CONTAINING PROTEIN
Bpl_scaf_44428-0.8
Bpl_scaf_44428-0.9DEOXYNUCLEOSIDE KINASE
Bpl_scaf_44428-1.11
Bpl_scaf_44428-1.5
Bpl_scaf_44428-1.6
Bpl_scaf_44428-2.1
Bpl_scaf_44428-2.4PROTEASE M1 ZINC METALLOPROTEASE
Bpl_scaf_44428-3.12KRAB AND ZINC FINGER DOMAIN-CONTAINING
Bpl_scaf_44428-3.13
Bpl_scaf_44428-3.15
Bpl_scaf_44428-3.17HL07962P-RELATED
Bpl_scaf_44428-3.22
Bpl_scaf_44428-3.45
Bpl_scaf_44428-3.48BEN DOMAIN-CONTAINING PROTEIN 3
Bpl_scaf_44428-3.50
Bpl_scaf_44428-3.52
Bpl_scaf_44428-3.55
Bpl_scaf_44428-3.58
Bpl_scaf_44428-3.59
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