About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_44642-0.1
Bpl_scaf_44642-0.3
Bpl_scaf_44642-1.5
Bpl_scaf_44642-1.8HELICASE WITH DEATH DOMAIN-RELATED
Bpl_scaf_44642-2.6
Bpl_scaf_44642-2.8
Bpl_scaf_44642-2.9
Bpl_scaf_44642-3.11EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED
Bpl_scaf_44642-3.12
Bpl_scaf_44642-3.13PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
Bpl_scaf_44642-3.38ACTIN
Bpl_scaf_44644-0.0
Bpl_scaf_44644-0.1
Bpl_scaf_44646-0.2
Bpl_scaf_44648-0.11VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_44649-0.2DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN
Bpl_scaf_44650-0.1EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER
Bpl_scaf_44650-0.12CEREBELLIN-RELATED
Bpl_scaf_44653-0.0
Bpl_scaf_44653-1.3ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_44653-3.20D-AMINOACYL-TRNA DEACYLASE
Bpl_scaf_44653-3.24INHIBITOR OF APOPTOSIS
Bpl_scaf_44653-3.27INHIBITOR OF APOPTOSIS
Bpl_scaf_44653-3.6CAAX PRENYL PROTEASE 1
Bpl_scaf_44653-3.7
Bpl_scaf_44672-0.0BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_44685-0.0
Bpl_scaf_44712-0.12
Bpl_scaf_44712-0.13
Bpl_scaf_44712-0.14
Bpl_scaf_44712-0.5
Bpl_scaf_44712-0.6
Bpl_scaf_44722-0.1AQUAPORIN TRANSPORTER
Bpl_scaf_44723-0.7TOLL-LIKE RECEPTOR
Bpl_scaf_44723-0.8TOLL-LIKE RECEPTOR
Bpl_scaf_44723-1.10CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81
Bpl_scaf_44723-1.2
Bpl_scaf_44723-1.8
Bpl_scaf_44723-2.1SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_44723-3.13
Bpl_scaf_44723-4.0
Bpl_scaf_44723-4.9METHYLTRANSFERASE-LIKE PROTEIN 24
Bpl_scaf_4473-0.4
Bpl_scaf_44730-0.0
Bpl_scaf_44730-0.2
Bpl_scaf_44741-0.2THAP DOMAIN PROTEIN
Bpl_scaf_44748-0.4PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1
Bpl_scaf_44748-0.5IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_44756-0.0
Bpl_scaf_44756-0.3
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