About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_46551-9.7USP DOMAIN-CONTAINING PROTEIN
Bpl_scaf_46552-1.19
Bpl_scaf_46552-1.20
Bpl_scaf_46552-1.21
Bpl_scaf_46552-1.22EPHRIN TYPE-B RECEPTOR
Bpl_scaf_46552-1.25
Bpl_scaf_46552-1.26EPHRIN TYPE-B RECEPTOR
Bpl_scaf_46552-1.27TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
Bpl_scaf_46552-1.29
Bpl_scaf_46560-0.0
Bpl_scaf_46562-1.10
Bpl_scaf_46562-1.12
Bpl_scaf_46562-1.20
Bpl_scaf_46564-0.0
Bpl_scaf_4657-0.10
Bpl_scaf_4657-0.9DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN
Bpl_scaf_46571-0.10UBIQUITIN DOMAIN-CONTAINING PROTEIN UBFD1
Bpl_scaf_46571-0.9MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_46571-1.0
Bpl_scaf_46571-1.1G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_46573-0.2D-RIBITOL-5-PHOSPHATE CYTIDYLYLTRANSFERASE
Bpl_scaf_46576-1.2
Bpl_scaf_46576-5.0
Bpl_scaf_46576-5.1
Bpl_scaf_46576-8.10LEUCYL-TRNA SYNTHETASE
Bpl_scaf_46576-8.27CYTOCHROME P450 508A4-RELATED
Bpl_scaf_46577-0.10
Bpl_scaf_46577-0.11
Bpl_scaf_46577-0.9
Bpl_scaf_46577-1.0
Bpl_scaf_46577-3.16ENDO-1,4-BETA-GLUCANASE
Bpl_scaf_46577-3.17ENDO-1,4-BETA-GLUCANASE
Bpl_scaf_46577-3.18
Bpl_scaf_46577-3.4PROSTAGLANDIN G/H SYNTHASE
Bpl_scaf_46577-3.5ENDO-1,4-BETA-GLUCANASE
Bpl_scaf_46577-4.11PCNA-ASSOCIATED FACTOR
Bpl_scaf_46577-4.8PROSTAGLANDIN G/H SYNTHASE
Bpl_scaf_46577-5.10
Bpl_scaf_46577-5.11
Bpl_scaf_46577-5.12
Bpl_scaf_46577-5.13MYOTROPHIN
Bpl_scaf_46577-5.17
Bpl_scaf_46577-5.2
Bpl_scaf_46577-6.0
Bpl_scaf_46577-6.1
Bpl_scaf_46577-6.10GLOBIN-LIKE PROTEIN
Bpl_scaf_46577-6.11-
Bpl_scaf_46577-6.12FUMARATE HYDRATASE-RELATED
Bpl_scaf_46577-6.19
Bpl_scaf_46577-7.4BETA TRANSDUCIN-RELATED PROTEIN
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