About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_46913-1.20FTP DOMAIN-CONTAINING PROTEIN
Bpl_scaf_46913-1.22POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Bpl_scaf_46913-1.6
Bpl_scaf_46913-2.4
Bpl_scaf_46913-2.7PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_46913-2.8TUMOR PROTEIN P53-INDUCIBLE PROTEIN 13
Bpl_scaf_46913-3.2EXPRESSED PROTEIN
Bpl_scaf_46913-3.3EXPRESSED PROTEIN
Bpl_scaf_46913-3.6
Bpl_scaf_46913-4.0
Bpl_scaf_46913-4.1
Bpl_scaf_46927-0.4ANOCTAMIN
Bpl_scaf_46927-1.3ANOCTAMIN
Bpl_scaf_46927-2.0
Bpl_scaf_46927-2.3ANOCTAMIN
Bpl_scaf_46927-2.4
Bpl_scaf_46927-3.6G-PROTEIN COUPLED RECEPTOR 158-RELATED
Bpl_scaf_46927-4.0BONUS, ISOFORM C-RELATED
Bpl_scaf_46927-4.1BONUS, ISOFORM C-RELATED
Bpl_scaf_46927-4.8
Bpl_scaf_4693-0.0
Bpl_scaf_4693-0.1DEFORMED EPIDERMAL AUTOREGULATORY FACTOR 1 HOMOLOG SUPPRESSIN
Bpl_scaf_4693-0.6
Bpl_scaf_4693-1.4
Bpl_scaf_4693-2.6
Bpl_scaf_4693-3.0
Bpl_scaf_4693-3.20ZGC:174356
Bpl_scaf_4693-3.3
Bpl_scaf_4693-4.4TRANSLATION FACTOR
Bpl_scaf_4693-5.11INTIMAL THICKNESS RECEPTOR-RELATED
Bpl_scaf_4693-5.13RNA-BINDING MOTIF PROTEIN, X-LINKED 2
Bpl_scaf_4693-5.23IONOTROPIC RECEPTOR 20A-RELATED
Bpl_scaf_4693-5.24
Bpl_scaf_4693-5.26ZINC FINGER PROTEIN 142
Bpl_scaf_4693-6.14CARBOHYDRATE SULFOTRANSFERASE
Bpl_scaf_4693-6.15RHO-TYPE GUANINE NUCLEOTIDE EXCHANGE FACTOR, ISOFORM F
Bpl_scaf_4693-6.16DNA POLYMERASE DELTA SUBUNIT 3
Bpl_scaf_4693-6.18LEUCINE CARBOXYL METHYLTRANSFERASE
Bpl_scaf_4693-6.27CARBOHYDRATE SULFOTRANSFERASE
Bpl_scaf_4693-6.8BONUS, ISOFORM C-RELATED
Bpl_scaf_46963-0.2
Bpl_scaf_46972-0.2
Bpl_scaf_46993-0.12
Bpl_scaf_47-0.6GTP-BINDING
Bpl_scaf_47011-0.13
Bpl_scaf_47041-0.9INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER
Bpl_scaf_4705-0.17ENDONUCLEASE-RELATED
Bpl_scaf_4705-0.18
Bpl_scaf_4705-0.19
Bpl_scaf_4705-0.20
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