About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_48701-0.23
Bpl_scaf_48701-0.3
Bpl_scaf_48710-0.1
Bpl_scaf_48710-0.2DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Bpl_scaf_48710-0.6LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
Bpl_scaf_48711-0.15
Bpl_scaf_48711-0.9ENDO-1,4-BETA-GLUCANASE
Bpl_scaf_48711-1.12ENDO-1,4-BETA-GLUCANASE
Bpl_scaf_48711-1.8
Bpl_scaf_48711-1.9G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_48720-0.0SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_48720-0.2CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_48720-0.5
Bpl_scaf_48720-1.1MANNOSYL PHOSPHORYLINOSITOL CERAMIDE SYNTHASE
Bpl_scaf_48720-1.8BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_48726-0.6MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED
Bpl_scaf_48726-0.7DRAB5-RELATED
Bpl_scaf_48726-1.19BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 1
Bpl_scaf_48726-1.21INHIBITOR OF APOPTOSIS
Bpl_scaf_48726-1.4CEREBELLIN-RELATED
Bpl_scaf_48727-0.11G DOMAIN-CONTAINING PROTEIN
Bpl_scaf_48727-0.3
Bpl_scaf_48727-0.6PARANEOPLASTIC ANTIGEN
Bpl_scaf_48727-1.0
Bpl_scaf_48727-1.10
Bpl_scaf_48727-1.19IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_48727-1.5ATP-DEPENDENT DNA HELICASE
Bpl_scaf_48727-1.6SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_48727-2.0
Bpl_scaf_48727-3.0
Bpl_scaf_48727-3.4
Bpl_scaf_48727-3.5CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_48727-3.9CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_48727-5.24TYROSINASE FAMILY MEMBER
Bpl_scaf_48727-5.25RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_48727-5.26
Bpl_scaf_48727-5.27
Bpl_scaf_48727-5.29
Bpl_scaf_48727-6.17
Bpl_scaf_48727-6.19
Bpl_scaf_48727-6.5
Bpl_scaf_48727-7.13PROTEIN CBG15099
Bpl_scaf_48727-7.21PROTEIN CBG15099
Bpl_scaf_48727-7.22PROTEIN CBG15099
Bpl_scaf_48727-7.24CADHERIN-87A
Bpl_scaf_48727-7.25TYROSINASE FAMILY MEMBER
Bpl_scaf_48727-7.31LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 11
Bpl_scaf_48736-0.0LORICRIN
Bpl_scaf_48736-0.1
Bpl_scaf_48736-1.0
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