About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_48949-1.16ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
Bpl_scaf_48949-1.17
Bpl_scaf_48949-1.18UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED
Bpl_scaf_48950-0.5SPORE COAT PROTEIN SP85
Bpl_scaf_48950-0.8DEATH DOMAIN-CONTAINING PROTEIN CRADD
Bpl_scaf_48951-0.1DUF614 FAMILY PROTEIN-RELATED
Bpl_scaf_48954-0.1
Bpl_scaf_48954-1.3POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Bpl_scaf_48954-1.7
Bpl_scaf_48965-0.10NECTIN-RELATED
Bpl_scaf_48965-0.5
Bpl_scaf_48965-0.7
Bpl_scaf_48965-0.9
Bpl_scaf_48965-1.5
Bpl_scaf_48965-1.7NECTIN-RELATED
Bpl_scaf_48965-2.12CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8
Bpl_scaf_48965-2.13
Bpl_scaf_48965-2.14
Bpl_scaf_48965-2.8
Bpl_scaf_48965-3.1
Bpl_scaf_48965-3.7SERINE/THREONINE-PROTEIN KINASE FRAY2
Bpl_scaf_48968-0.3TONSOKU-LIKE PROTEIN
Bpl_scaf_48969-0.4
Bpl_scaf_48970-0.5CHITINASE
Bpl_scaf_48970-1.10CENTROMERE PROTEIN X
Bpl_scaf_48970-1.22PROTEIN ENHANCER OF SEVENLESS 2B
Bpl_scaf_48970-1.6
Bpl_scaf_48970-1.9PROTEIN ENHANCER OF SEVENLESS 2B
Bpl_scaf_48970-2.3CEREBELLIN-RELATED
Bpl_scaf_48970-2.5
Bpl_scaf_48970-2.6
Bpl_scaf_48970-3.11N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER
Bpl_scaf_48970-3.12UNC-13-4A, ISOFORM B
Bpl_scaf_48982-0.4
Bpl_scaf_48982-0.5
Bpl_scaf_48992-0.4
Bpl_scaf_49005-0.0-
Bpl_scaf_49011-0.0
Bpl_scaf_49017-0.19
Bpl_scaf_49017-0.3RPE-SPONDIN
Bpl_scaf_49017-1.18CEREBELLIN-RELATED
Bpl_scaf_49017-1.41
Bpl_scaf_49017-1.43CEREBELLIN-RELATED
Bpl_scaf_49017-1.45CEREBELLIN-RELATED
Bpl_scaf_49017-2.8
Bpl_scaf_49017-3.20CELL FATE DETERMINING PROTEIN MAB21-RELATED
Bpl_scaf_49017-3.21
Bpl_scaf_49017-3.22
Bpl_scaf_49017-3.23
Bpl_scaf_49017-3.24MONOCARBOXYLATE TRANSPORTER
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