About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_48747-0.1
Bpl_scaf_48747-1.25VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_48747-1.26VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_48763-0.4ELECTRON TRANSPORT OXIDOREDUCTASE
Bpl_scaf_48763-1.12PROTEIN DISULFIDE-ISOMERASE A6
Bpl_scaf_48763-1.13PROTEIN DISULFIDE-ISOMERASE A6
Bpl_scaf_48763-1.16
Bpl_scaf_48769-0.5TRANSCRIPTIONAL REGULATOR ATRX
Bpl_scaf_48769-0.6RAD54-LIKE
Bpl_scaf_48769-1.4
Bpl_scaf_48769-1.5
Bpl_scaf_48773-0.1
Bpl_scaf_48777-1.1
Bpl_scaf_48777-1.5KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Bpl_scaf_48777-1.6
Bpl_scaf_48786-0.0
Bpl_scaf_48788-0.6
Bpl_scaf_48788-0.7
Bpl_scaf_48788-1.0
Bpl_scaf_48788-1.12GLYPICAN
Bpl_scaf_48788-1.19
Bpl_scaf_48788-1.20ANGIOMOTIN
Bpl_scaf_48788-1.21METAXIN RELATED
Bpl_scaf_48789-0.6NONSYNDROMIC HEARING IMPAIRMENT PROTEIN
Bpl_scaf_48789-0.7
Bpl_scaf_48789-1.10
Bpl_scaf_48789-1.9
Bpl_scaf_48789-2.7VESICULAR-FUSION PROTEIN NSF
Bpl_scaf_48789-3.0WNT RELATED
Bpl_scaf_48789-4.0WNT RELATED
Bpl_scaf_48789-4.3WNT RELATED
Bpl_scaf_48789-5.0WNT RELATED
Bpl_scaf_48789-5.20PUTATIVE-RELATED
Bpl_scaf_48789-5.4WNT RELATED
Bpl_scaf_48789-6.23FORKHEAD BOX PROTEIN J1
Bpl_scaf_48789-6.3
Bpl_scaf_48789-6.7INNEXIN
Bpl_scaf_48789-6.9MATRIN 3/NUCLEAR PROTEIN 220-RELATED
Bpl_scaf_48789-7.2BONUS, ISOFORM C-RELATED
Bpl_scaf_48789-7.6INNEXIN
Bpl_scaf_48789-7.9INNEXIN
Bpl_scaf_48789-8.12
Bpl_scaf_48789-8.13
Bpl_scaf_48789-8.30
Bpl_scaf_48789-8.31
Bpl_scaf_48789-8.32TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Bpl_scaf_48789-8.5
Bpl_scaf_488-0.0
Bpl_scaf_488-0.1
Bpl_scaf_488-0.12BTB/POZ DOMAIN-CONTAINING
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