About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_018196-T1
LLU|FUN_018197-T1CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 5
LLU|FUN_018198-T1FACIOGENITAL DYSPLASIA PROTEIN
LLU|FUN_018199-T1SEC63 DOMAIN-CONTAINING
LLU|FUN_018200-T1
LLU|FUN_018201-T1
LLU|FUN_018202-T1METABOTROPIC GLUTAMATE RECEPTOR
LLU|FUN_018203-T1METABOTROPIC GLUTAMATE RECEPTOR
LLU|FUN_018204-T1
LLU|FUN_018205-T1
LLU|FUN_018206-T1METABOTROPIC GLUTAMATE RECEPTOR
LLU|FUN_018207-T1
LLU|FUN_018208-T1
LLU|FUN_018209-T1
LLU|FUN_018210-T1
LLU|FUN_018211-T1
LLU|FUN_018212-T1
LLU|FUN_018213-T1PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1
LLU|FUN_018214-T1
LLU|FUN_018215-T1
LLU|FUN_018216-T1
LLU|FUN_018217-T1
LLU|FUN_018218-T1
LLU|FUN_018219-T1
LLU|FUN_018220-T1
LLU|FUN_018221-T1DUAL SERINE/THREONINE AND TYROSINE PROTEIN KINASE
LLU|FUN_018222-T1UNCHARACTERIZED
LLU|FUN_018223-T1UNCHARACTERIZED
LLU|FUN_018224-T1UNCHARACTERIZED
LLU|FUN_018225-T1NEPHRIN
LLU|FUN_018226-T1COLLAGEN ALPHA
LLU|FUN_018227-T1
LLU|FUN_018228-T1ALKALINE PHOSPHATASE
LLU|FUN_018229-T1
LLU|FUN_018230-T1OS10G0105400 PROTEIN
LLU|FUN_018231-T1
LLU|FUN_018232-T1MULTIPLE COAGULATION FACTOR DEFICIENCY PROTEIN 2 NEURAL STEM CELL DERIVED NEURONAL SURVIVAL PROTEIN
LLU|FUN_018233-T1
LLU|FUN_018234-T1
LLU|FUN_018235-T1
LLU|FUN_018236-T1
LLU|FUN_018237-T1AMYLOID PROTEIN-BINDING PROTEIN 2
LLU|FUN_018238-T1NUCLEOLAR COMPLEX PROTEIN 4
LLU|FUN_018239-T1HELICASE SRCAP-RELATED
LLU|FUN_018240-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_018241-T1RAS-RESPONSIVE ELEMENT-BINDING PROTEIN 1
LLU|FUN_018242-T1TEKTIN
LLU|FUN_018243-T1SUCCINATE/FUMARATE MITOCHONDRIAL TRANSPORTER-RELATED
LLU|FUN_018244-T1SUCCINATE/FUMARATE MITOCHONDRIAL TRANSPORTER-RELATED
LLU|FUN_018245-T1
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