About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_018296-T1
LLU|FUN_018297-T1FLAVIN MONOAMINE OXIDASE
LLU|FUN_018298-T1TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3
LLU|FUN_018299-T1CYTOKINE RECEPTOR
LLU|FUN_018300-T1MICROTUBULE-ASSOCIATED PROTEIN
LLU|FUN_018301-T1AAA DOMAIN-CONTAINING
LLU|FUN_018302-T1
LLU|FUN_018303-T1ARYL HYDROCARBON RECEPTOR
LLU|FUN_018304-T1
LLU|FUN_018305-T1ARYL HYDROCARBON RECEPTOR
LLU|FUN_018306-T1SMITH-MAGENIS SYNDROME REGION GENE 8 PROTEIN
LLU|FUN_018307-T1CTP SYNTHASE
LLU|FUN_018308-T1HISTONE DEACETYLASE HDAC1-RELATED
LLU|FUN_018309-T1-
LLU|FUN_018310-T1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
LLU|FUN_018311-T1
LLU|FUN_018312-T1DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED
LLU|FUN_018313-T1
LLU|FUN_018314-T1DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED
LLU|FUN_018315-T1
LLU|FUN_018316-T1RWD DOMAIN-CONTAINING PROTEIN
LLU|FUN_018317-T1LD44813P
LLU|FUN_018318-T1O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN
LLU|FUN_018319-T1TRANSGELIN
LLU|FUN_018320-T1
LLU|FUN_018321-T1BLR2807 PROTEIN
LLU|FUN_018322-T1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
LLU|FUN_018323-T1
LLU|FUN_018324-T1
LLU|FUN_018325-T1NME/NM23 FAMILY MEMBER 8
LLU|FUN_018326-T1
LLU|FUN_018327-T1
LLU|FUN_018328-T1
LLU|FUN_018329-T1
LLU|FUN_018330-T1
LLU|FUN_018331-T1
LLU|FUN_018332-T1
LLU|FUN_018333-T1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_018334-T1
LLU|FUN_018335-T1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR
LLU|FUN_018336-T1
LLU|FUN_018337-T1
LLU|FUN_018338-T1
LLU|FUN_018339-T1-
LLU|FUN_018340-T1
LLU|FUN_018341-T1
LLU|FUN_018342-T1
LLU|FUN_018343-T1
LLU|FUN_018344-T1
LLU|FUN_018345-T1
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