About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_018246-T1COPINE FAMILY PROTEIN 1
LLU|FUN_018247-T1
LLU|FUN_018248-T1ZGC:195170
LLU|FUN_018249-T1OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN
LLU|FUN_018250-T1CYTOCHROME B5
LLU|FUN_018251-T1
LLU|FUN_018252-T1
LLU|FUN_018253-T12-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
LLU|FUN_018254-T15-HYDROXYTRYPTAMINE RECEPTOR
LLU|FUN_018255-T1
LLU|FUN_018256-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 157
LLU|FUN_018257-T1RING ZINC FINGER
LLU|FUN_018258-T1
LLU|FUN_018259-T1
LLU|FUN_018260-T1
LLU|FUN_018261-T1
LLU|FUN_018262-T1WD40 REPEAT PROTEIN
LLU|FUN_018263-T139S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL
LLU|FUN_018264-T1
LLU|FUN_018265-T1
LLU|FUN_018266-T1
LLU|FUN_018267-T1
LLU|FUN_018268-T1
LLU|FUN_018269-T1PHOSPHATIDYLINOSITOL SYNTHASE
LLU|FUN_018270-T1
LLU|FUN_018271-T1
LLU|FUN_018272-T1
LLU|FUN_018273-T1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
LLU|FUN_018274-T1
LLU|FUN_018275-T1
LLU|FUN_018276-T1N-LYSINE METHYLTRANSFERASE KMT5A
LLU|FUN_018277-T1STRAWBERRY NOTCH-RELATED
LLU|FUN_018278-T1COILED-COIL DOMAIN-CONTAINING 74A
LLU|FUN_018279-T1
LLU|FUN_018280-T1UNCHARACTERIZED
LLU|FUN_018281-T1
LLU|FUN_018282-T1INNEXIN
LLU|FUN_018283-T1INNEXIN
LLU|FUN_018284-T1-
LLU|FUN_018285-T1
LLU|FUN_018286-T1
LLU|FUN_018287-T1INNEXIN
LLU|FUN_018288-T1
LLU|FUN_018289-T1
LLU|FUN_018290-T1
LLU|FUN_018291-T1
LLU|FUN_018292-T1MACROGLOBULIN / COMPLEMENT
LLU|FUN_018293-T1
LLU|FUN_018294-T1
LLU|FUN_018295-T1
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