About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_018346-T1
LLU|FUN_018347-T1
LLU|FUN_018348-T1
LLU|FUN_018349-T1MYCBP-ASSOCIATED PROTEIN
LLU|FUN_018350-T1
LLU|FUN_018351-T1PHOSPHATIDYLETHANOLAMINE N-METHYLTRANSFERASE
LLU|FUN_018352-T1HEAT SHOCK PROTEIN HSP-12.2-RELATED
LLU|FUN_018353-T1
LLU|FUN_018354-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_018355-T1
LLU|FUN_018356-T1HEAT SHOCK PROTEIN HSP-12.2-RELATED
LLU|FUN_018357-T1
LLU|FUN_018358-T1
LLU|FUN_018359-T1
LLU|FUN_018360-T1
LLU|FUN_018361-T1UNCHARACTERIZED
LLU|FUN_018362-T1UNCHARACTERIZED
LLU|FUN_018363-T1
LLU|FUN_018364-T1BTK-BINDING PROTEIN-RELATED
LLU|FUN_018365-T1APRATAXIN-RELATED
LLU|FUN_018366-T1SUCCINYL-COA SYNTHETASE BETA CHAIN
LLU|FUN_018367-T1
LLU|FUN_018368-T1
LLU|FUN_018369-T1
LLU|FUN_018370-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_018371-T1DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED
LLU|FUN_018372-T1CARNITINE O-ACYLTRANSFERASE
LLU|FUN_018373-T1CARNITINE O-ACYLTRANSFERASE
LLU|FUN_018374-T1
LLU|FUN_018375-T1
LLU|FUN_018376-T1
LLU|FUN_018377-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_018378-T1DEATH DOMAIN-CONTAINING PROTEIN CRADD
LLU|FUN_018379-T1OVOCHYMASE-RELATED
LLU|FUN_018380-T1
LLU|FUN_018381-T1
LLU|FUN_018382-T1
LLU|FUN_018383-T1SKI ONCOGENE-RELATED
LLU|FUN_018384-T1
LLU|FUN_018385-T1
LLU|FUN_018386-T1
LLU|FUN_018387-T1TYROSINE-PROTEIN KINASE
LLU|FUN_018388-T1
LLU|FUN_018389-T1
LLU|FUN_018390-T1ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
LLU|FUN_018391-T1TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER
LLU|FUN_018392-T1TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER
LLU|FUN_018393-T1FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I
LLU|FUN_018394-T1
LLU|FUN_018395-T1PROTEIN DISPATCHED-RELATED
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