About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_018146-T1
LLU|FUN_018147-T1
LLU|FUN_018148-T1
LLU|FUN_018149-T1
LLU|FUN_018150-T1
LLU|FUN_018151-T1
LLU|FUN_018152-T1
LLU|FUN_018153-T1PROTEASE M50 MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE 2 PROTEASE
LLU|FUN_018154-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER
LLU|FUN_018155-T1PROTEIN AD-016-RELATED
LLU|FUN_018156-T1
LLU|FUN_018157-T1
LLU|FUN_018158-T1
LLU|FUN_018159-T1LIM DOMAIN-CONTAINING PROTEIN
LLU|FUN_018160-T1
LLU|FUN_018161-T1FOUR AND A HALF LIM DOMAINS PROTEIN
LLU|FUN_018162-T1SIALATE O-ACETYLESTERASE
LLU|FUN_018163-T1
LLU|FUN_018164-T1SIALATE O-ACETYLESTERASE
LLU|FUN_018165-T1RAS-LIKE FAMILY MEMBER 11
LLU|FUN_018166-T1
LLU|FUN_018167-T1GLUTATHIONYL-HYDROQUINONE REDUCTASE
LLU|FUN_018168-T1GLUTATHIONYL-HYDROQUINONE REDUCTASE
LLU|FUN_018169-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_018170-T1
LLU|FUN_018171-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_018172-T1
LLU|FUN_018173-T1
LLU|FUN_018174-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_018175-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_018176-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_018177-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_018178-T1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_018179-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_018180-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_018181-T1
LLU|FUN_018182-T1
LLU|FUN_018183-T1
LLU|FUN_018184-T1
LLU|FUN_018185-T1
LLU|FUN_018186-T1
LLU|FUN_018187-T1
LLU|FUN_018188-T1
LLU|FUN_018189-T1TUDOR DOMAIN CONTAINING PROTEIN
LLU|FUN_018190-T1
LLU|FUN_018191-T1TNF RECEPTOR ASSOCIATED FACTOR
LLU|FUN_018192-T1
LLU|FUN_018193-T1HOMEOBOX PROTEIN HMX
LLU|FUN_018194-T1
LLU|FUN_018195-T1NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
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