About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_017946-T1
LLU|FUN_017947-T1
LLU|FUN_017948-T1NADH DEHYDROGENASE (UBIQUINONE) 1 BETA SUBCOMPLEX, 4
LLU|FUN_017949-T1
LLU|FUN_017950-T1
LLU|FUN_017951-T1
LLU|FUN_017952-T1
LLU|FUN_017953-T1MUSCLEBLIND-LIKE PROTEIN
LLU|FUN_017954-T1
LLU|FUN_017955-T1
LLU|FUN_017956-T1
LLU|FUN_017957-T1UNCHARACTERIZED
LLU|FUN_017958-T1
LLU|FUN_017959-T1
LLU|FUN_017960-T1
LLU|FUN_017961-T1ALCOHOL O-ACETYLTRANSFERASE 1-RELATED
LLU|FUN_017962-T1OUTER SEGMENT 5
LLU|FUN_017963-T1
LLU|FUN_017964-T1
LLU|FUN_017965-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_017966-T1
LLU|FUN_017967-T1OVOCHYMASE-RELATED
LLU|FUN_017968-T1
LLU|FUN_017969-T1
LLU|FUN_017970-T1PUTATIVE TREBLE-CLEF ZINC-FINGER C2ORF42 FAMILY MEMBER
LLU|FUN_017971-T1
LLU|FUN_017972-T1
LLU|FUN_017973-T1
LLU|FUN_017974-T1
LLU|FUN_017975-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_017976-T1
LLU|FUN_017977-T1FI04643P-RELATED
LLU|FUN_017978-T1
LLU|FUN_017979-T1
LLU|FUN_017980-T1SODIUM/POTASSIUM/CALCIUM EXCHANGER
LLU|FUN_017981-T1
LLU|FUN_017982-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_017983-T1
LLU|FUN_017984-T1FRAGILE X MENTAL RETARDATION SYNDROME-RELATED PROTEIN
LLU|FUN_017985-T1
LLU|FUN_017986-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
LLU|FUN_017987-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
LLU|FUN_017988-T1WD REPEAT DOMAIN 44
LLU|FUN_017989-T1LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN
LLU|FUN_017990-T1-
LLU|FUN_017991-T1METHIONINE SULFOXIDE REDUCTASE
LLU|FUN_017992-T1IRE1-RELATED
LLU|FUN_017993-T1UNCHARACTERIZED
LLU|FUN_017994-T1
LLU|FUN_017995-T1RGD1565685 PROTEIN
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