About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_018446-T1RIBONUCLEASE III
LLU|FUN_018447-T1MITOCHONDRIAL RIBOSOMAL PROTEIN 63
LLU|FUN_018448-T1ELONGATION FACTOR TU-RELATED
LLU|FUN_018449-T1SI:CH211-262H13.3-RELATED-RELATED
LLU|FUN_018450-T1NUCLEAR SPECKLE SPLICING REGULATORY PROTEIN 1
LLU|FUN_018451-T1BONUS, ISOFORM C-RELATED
LLU|FUN_018452-T1REQUIRED FOR MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG
LLU|FUN_018453-T1RAN BINDING PROTEIN
LLU|FUN_018454-T1
LLU|FUN_018455-T1
LLU|FUN_018456-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_018457-T1
LLU|FUN_018458-T1
LLU|FUN_018459-T1
LLU|FUN_018460-T1
LLU|FUN_018461-T1MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
LLU|FUN_018462-T1
LLU|FUN_018467-T1ADP-RIBOSYLGLYCOHYDROLASE
LLU|FUN_018468-T1
LLU|FUN_018469-T1
LLU|FUN_018470-T1
LLU|FUN_018471-T1IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX
LLU|FUN_018472-T1
LLU|FUN_018473-T1
LLU|FUN_018474-T1
LLU|FUN_018475-T1
LLU|FUN_018476-T1
LLU|FUN_018477-T1
LLU|FUN_018478-T1
LLU|FUN_018479-T1UNCHARACTERIZED
LLU|FUN_018480-T1
LLU|FUN_018481-T1UNCHARACTERIZED
LLU|FUN_018482-T1
LLU|FUN_018483-T1
LLU|FUN_018484-T1
LLU|FUN_018485-T1
LLU|FUN_018486-T1
LLU|FUN_018487-T1
LLU|FUN_018488-T1IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX
LLU|FUN_018489-T1
LLU|FUN_018490-T1
LLU|FUN_018491-T1
LLU|FUN_018492-T1IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX
LLU|FUN_018493-T1
LLU|FUN_018494-T1
LLU|FUN_018495-T1
LLU|FUN_018496-T1
LLU|FUN_018497-T1FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
LLU|FUN_018498-T1FAS-ASSOCIATED PROTEIN
LLU|FUN_018499-T1PYRROLINE-5-CARBOXYLATE REDUCTASE
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