About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 348 349 350 351 352 353 354 355 356 357 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_018977-T1
OS493_018978-T1
OS493_018979-T1OLIGOPEPTIDE TRANSPORTER-RELATED
OS493_018980-T1
OS493_018981-T1
OS493_018982-T1NF-E2 INDUCIBLE PROTEIN
OS493_018983-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
OS493_018984-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
OS493_018985-T1AGAP008170-PA
OS493_018986-T1PROTEIN PSIB-RELATED-RELATED
OS493_018987-T1THROMBOSPONDIN
OS493_018988-T1MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN
OS493_018989-T1
OS493_018990-T1C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 180
OS493_018991-T1
OS493_018992-T1KILLER CELL LECTIN-LIKE RECEPTOR SUBFAMILY F MEMBER 2
OS493_018993-T1
OS493_018994-T1C-TYPE LECTIN DOMAIN FAMILY 12 MEMBER A-RELATED
OS493_018995-T1
OS493_018996-T1KILLER CELL LECTIN-LIKE RECEPTOR SUBFAMILY F MEMBER 2
OS493_018997-T1KILLER CELL LECTIN-LIKE RECEPTOR SUBFAMILY F MEMBER 2
OS493_018998-T1ADDUCIN
OS493_018999-T1
OS493_019000-T1
OS493_019001-T1
OS493_019002-T1
OS493_019004-T1ALDEHYDE DEHYDROGENASE
OS493_019005-T1ALDEHYDE DEHYDROGENASE
OS493_019007-T1PROTEIN-TYROSINE SULFOTRANSFERASE 2
OS493_019008-T1
OS493_019009-T1PROTEIN-TYROSINE SULFOTRANSFERASE 2
OS493_019010-T1CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
OS493_019011-T1CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
OS493_019012-T1CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
OS493_019013-T1CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
OS493_019014-T1ARRESTIN DOMAIN CONTAINING PROTEIN
OS493_019015-T1ARRESTIN DOMAIN CONTAINING PROTEIN
OS493_019016-T1DNA REPAIR PROTEIN XRCC4
OS493_019017-T1AMINOPEPTIDASE
OS493_019018-T1AMINOPEPTIDASE
OS493_019019-T1ARRESTIN DOMAIN CONTAINING PROTEIN
OS493_019020-T1ARRESTIN DOMAIN CONTAINING PROTEIN
OS493_019021-T1ARRESTIN DOMAIN CONTAINING PROTEIN
OS493_019022-T1
OS493_019023-T1
OS493_019024-T1FI04035P
OS493_019025-T1ARRESTIN DOMAIN CONTAINING PROTEIN
OS493_019026-T1
OS493_019027-T1
OS493_019028-T1
TOP