About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_018869-T1
OS493_018870-T1IONOTROPIC GLUTAMATE RECEPTOR
OS493_018872-T1ADHESION G-PROTEIN COUPLED RECEPTOR
OS493_018873-T1C-TYPE LECTIN SUPERFAMILY MEMBER
OS493_018874-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_018875-T1LEUCOKININ RECEPTOR-RELATED
OS493_018876-T1LEUCOKININ RECEPTOR-RELATED
OS493_018877-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
OS493_018878-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
OS493_018879-T1LEUCOKININ RECEPTOR-RELATED
OS493_018880-T1G-PROTEIN COUPLED RECEPTOR
OS493_018881-T1
OS493_018882-T1
OS493_018883-T1LEUCOKININ RECEPTOR-RELATED
OS493_018885-T1LEUCOKININ RECEPTOR-RELATED
OS493_018886-T1
OS493_018887-T1PHOSPHATIDYLCHOLINE TRANSFER PROTEIN
OS493_018888-T1MOLTING PROTEIN MLT-4
OS493_018889-T1MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN
OS493_018890-T1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 27
OS493_018891-T1
OS493_018892-T1
OS493_018893-T1
OS493_018894-T1MULTICOPPER OXIDASE-RELATED
OS493_018895-T1
OS493_018896-T1MULTICOPPER OXIDASE-RELATED
OS493_018898-T1POLYCYSTIN FAMILY MEMBER
OS493_018899-T1POLYCYSTIN-1
OS493_018900-T1MULTICOPPER OXIDASE-RELATED
OS493_018901-T1MULTICOPPER OXIDASE-RELATED
OS493_018902-T1MULTICOPPER OXIDASE-RELATED
OS493_018903-T1MULTICOPPER OXIDASE-RELATED
OS493_018904-T1
OS493_018905-T1CHONDROITIN SYNTHASE
OS493_018906-T1CHONDROITIN SYNTHASE
OS493_018907-T1CHONDROITIN SYNTHASE
OS493_018909-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_018910-T1WD REPEAT CONTAINING PROTEIN
OS493_018911-T1
OS493_018912-T1
OS493_018913-T1MYOSIN HEAVY CHAIN, NON-MUSCLE
OS493_018914-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_018915-T1ENDOCHITINASE
OS493_018916-T1
OS493_018917-T1CYTOKINE RECEPTOR
OS493_018918-T1CYTOKINE RECEPTOR
OS493_018919-T1CYTOKINE RECEPTOR
OS493_018920-T1SI:CH211-161H7.5-RELATED
OS493_018921-T1PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY F MEMBER 2-RELATED
OS493_018922-T1
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