About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_018560-T1
OS493_018561-T1SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
OS493_018562-T1
OS493_018563-T1EXPRESSED PROTEIN
OS493_018564-T1
OS493_018565-T1
OS493_018566-T1EXPRESSED PROTEIN
OS493_018567-T1
OS493_018568-T1
OS493_018569-T1IMMUNOGLOBULIN-BINDING PROTEIN 1
OS493_018570-T1MOLTING PROTEIN MLT-4
OS493_018571-T1PROTEIN FMC1 HOMOLOG
OS493_018572-T1POU DOMAIN
OS493_018573-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
OS493_018574-T1
OS493_018575-T1
OS493_018576-T1
OS493_018577-T1SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED
OS493_018578-T1VACUOLAR ATP SYNTHASE SUBUNIT F
OS493_018579-T1DEOXYNUCLEOSIDE KINASE
OS493_018580-T1ADENOSINE/GUANOSINE DIPHOSPHATASE
OS493_018581-T1
OS493_018582-T1ROTATIN
OS493_018583-T1
OS493_018584-T1
OS493_018585-T1
OS493_018586-T1-
OS493_018587-T1ATP-DEPENDENT RNA HELICASE
OS493_018588-T1
OS493_018589-T1
OS493_018590-T1DYSTROBREVIN BINDING PROTEIN 1 DYSBINDIN
OS493_018591-T1
OS493_018592-T1
OS493_018593-T1CCCH ZINGC FINGER
OS493_018594-T1TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5
OS493_018595-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_018596-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_018597-T1
OS493_018598-T1
OS493_018599-T1
OS493_018600-T1DEAD-BOX ATP-DEPENDENT RNA HELICASE 50
OS493_018601-T1
OS493_018602-T1
OS493_018603-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
OS493_018604-T1
OS493_018605-T1
OS493_018606-T1
OS493_018607-T1CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL
OS493_018608-T1ROTATIN
OS493_018609-T1ROTATIN
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