About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_018402-T1RWD DOMAIN-CONTAINING PROTEIN
OS493_018403-T1
OS493_018404-T1AMINOPEPTIDASE
OS493_018405-T1O-METHYLTRANSFERASE-RELATED
OS493_018406-T1AMINOPEPTIDASE
OS493_018407-T1O-METHYLTRANSFERASE-RELATED
OS493_018408-T1O-METHYLTRANSFERASE-RELATED
OS493_018409-T1MITOCHONDRIAL DIVISION PROTEIN 1-RELATED
OS493_018410-T1MITOCHONDRIAL DIVISION PROTEIN 1-RELATED
OS493_018411-T1TIAM (MAMMALIAN TUMOR INVASION AND METASTASIS FACTOR) HOMOLOG
OS493_018412-T1TIAM (MAMMALIAN TUMOR INVASION AND METASTASIS FACTOR) HOMOLOG
OS493_018413-T1CALCIPRESSIN
OS493_018414-T1
OS493_018415-T1
OS493_018416-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
OS493_018417-T1FAT ATYPICAL CADHERIN-RELATED
OS493_018418-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
OS493_018419-T1
OS493_018420-T1
OS493_018421-T1INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
OS493_018422-T1
OS493_018423-T1DNA2/NAM7 HELICASE FAMILY MEMBER
OS493_018424-T1
OS493_018425-T1
OS493_018426-T1
OS493_018427-T1
OS493_018428-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_018429-T1EXPRESSED PROTEIN
OS493_018430-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_018431-T1EXPRESSED PROTEIN
OS493_018432-T1G-PROTEIN COUPLED RECEPTOR
OS493_018433-T1PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4
OS493_018434-T1PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4
OS493_018435-T1ADIPOR/PROGESTIN RECEPTOR-RELATED
OS493_018436-T1ADIPOR/PROGESTIN RECEPTOR-RELATED
OS493_018437-T1
OS493_018438-T1
OS493_018440-T1
OS493_018441-T1PROSTAGLANDIN REDUCTASE
OS493_018442-T1PROSTAGLANDIN REDUCTASE
OS493_018443-T1POU DOMAIN
OS493_018444-T1HEPARAN SULFATE 2-O-SULFOTRANSFERASE
OS493_018445-T1
OS493_018446-T1DNAJ HOMOLOG SUBFAMILY C MEMBER
OS493_018447-T1DNAJ HOMOLOG SUBFAMILY C MEMBER
OS493_018448-T1BCL2-ASSOCIATED ATHANOGENE
OS493_018449-T1TNFAIP3-INTERACTING PROTEIN COILED COIL FAMILY MEMBER
OS493_018450-T1TRANSMEMBRANE PROTEIN 181
OS493_018451-T1FLAVIN MONOAMINE OXIDASE
OS493_018452-T1FLAVIN MONOAMINE OXIDASE
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