About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 343 344 345 346 347 348 349 350 351 352 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_018716-T1
OS493_018717-T1DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
OS493_018718-T1SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED
OS493_018719-T1GDP-MANNOSE 4,6-DEHYDRATASE
OS493_018720-T1
OS493_018721-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
OS493_018722-T1FORKHEAD BOX PROTEIN
OS493_018723-T1FORKHEAD BOX PROTEIN
OS493_018724-T1FORKHEAD BOX PROTEIN
OS493_018725-T1
OS493_018726-T1
OS493_018727-T139S RIBOSOMAL PROTEIN L20
OS493_018728-T1
OS493_018729-T1RING FINGER PROTEIN 31-RELATED
OS493_018730-T1RING FINGER PROTEIN 31-RELATED
OS493_018731-T1
OS493_018732-T1RING FINGER PROTEIN 31-RELATED
OS493_018734-T1GLYCOSYLTRANSFERASE
OS493_018735-T1
OS493_018736-T1RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED
OS493_018737-T1RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED
OS493_018738-T1RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED
OS493_018739-T1ALPHA-N-ACETYLGLUCOSAMINIDASE
OS493_018740-T1NULP1-RELATED
OS493_018741-T1
OS493_018742-T1DNA2/NAM7 HELICASE FAMILY
OS493_018743-T1
OS493_018744-T1DNA2/NAM7 HELICASE FAMILY
OS493_018745-T1
OS493_018746-T1
OS493_018747-T1
OS493_018748-T1
OS493_018749-T1DNA2/NAM7 HELICASE FAMILY
OS493_018750-T1
OS493_018751-T1
OS493_018752-T1DNA2/NAM7 HELICASE FAMILY
OS493_018753-T1
OS493_018754-T1DNA2/NAM7 HELICASE FAMILY
OS493_018755-T1DNA2/NAM7 HELICASE FAMILY
OS493_018756-T1
OS493_018757-T1
OS493_018758-T1
OS493_018759-T1DNA2/NAM7 HELICASE FAMILY
OS493_018760-T1NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
OS493_018761-T1
OS493_018762-T1
OS493_018763-T1
OS493_018764-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
OS493_018765-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
OS493_018766-T1
TOP