About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_040639-T1NADH DEHYDROGENASE
OS493_040640-T1NADH DEHYDROGENASE
OS493_040641-T1
OS493_040642-T1
OS493_040643-T1
OS493_040644-T1TRANSMEMBRANE PROTEIN WITH METALLOPHOSPHOESTERASE DOMAIN-RELATED
OS493_040647-T1ARP2/3 COMPLEX 20 KD SUBUNIT
OS493_040648-T1CASEIN KINASE-RELATED
OS493_040650-T1
OS493_040653-T1
OS493_040654-T1
OS493_040655-T1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
OS493_040656-T1
OS493_040657-T1
OS493_040658-T1DUAL SERINE/THREONINE AND TYROSINE PROTEIN KINASE
OS493_040659-T1
OS493_040660-T1
OS493_040661-T1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
OS493_040662-T1
OS493_040663-T1
OS493_040664-T1
OS493_040665-T1
OS493_040667-T1
OS493_040668-T1MULTICOPPER OXIDASE-RELATED
OS493_040669-T1
OS493_040671-T1FER-1-LIKE
OS493_040672-T1JITTERBUG, ISOFORM N
OS493_040673-T1
OS493_040674-T1
OS493_040675-T1JITTERBUG, ISOFORM N
OS493_040676-T1
OS493_040677-T1EXPRESSED PROTEIN
OS493_040678-T1
OS493_040680-T1SOLUTE CARRIER FAMILY 22 MEMBER
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