About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_040568-T1
OS493_040569-T1
OS493_040570-T1
OS493_040571-T1
OS493_040572-T1CUB DOMAIN-CONTAINING PROTEIN
OS493_040573-T1
OS493_040574-T1
OS493_040575-T1
OS493_040576-T1MULTICOPPER OXIDASE-RELATED
OS493_040577-T1MEMBRALIN/KINETOCHORE PROTEIN NUF2
OS493_040579-T1
OS493_040581-T1
OS493_040582-T1POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1
OS493_040583-T1SACSIN
OS493_040584-T1SLR5058 PROTEIN
OS493_040585-T1
OS493_040586-T1
OS493_040587-T1
OS493_040588-T1-
OS493_040589-T1
OS493_040590-T1EG:EG0003.4 PROTEIN-RELATED
OS493_040591-T1
OS493_040592-T1
OS493_040593-T1ZINC FINGER RNA-BINDING PROTEIN
OS493_040594-T1NUCLEOPROTEIN TPR-RELATED
OS493_040595-T1
OS493_040596-T1
OS493_040597-T1
OS493_040598-T1
OS493_040614-T1
OS493_040615-T1
OS493_040616-T1
OS493_040617-T1
OS493_040618-T1
OS493_040619-T1
OS493_040620-T1
OS493_040622-T1DYNEIN INTERMEDIATE CHAIN
OS493_040623-T1
OS493_040624-T1
OS493_040625-T1METHIONINE SYNTHASE
OS493_040626-T1
OS493_040629-T1PROPERDIN
OS493_040630-T1TUDOR DOMAIN CONTAINING PROTEIN
OS493_040631-T1
OS493_040632-T1
OS493_040633-T1PIKACHURIN-LIKE PROTEIN
OS493_040634-T1
OS493_040635-T1OLFACTOMEDIN-RELATED
OS493_040636-T1
OS493_040637-T1
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