About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_019029-T1
OS493_019030-T1
OS493_019031-T1
OS493_019032-T1
OS493_019033-T1
OS493_019034-T1
OS493_019035-T1JBTS17
OS493_019036-T1
OS493_019037-T1
OS493_019038-T1SLL0310 PROTEIN
OS493_019039-T1
OS493_019040-T1JBTS17
OS493_019041-T1LEPTIN RECEPTOR-RELATED
OS493_019042-T1
OS493_019043-T1NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED
OS493_019044-T1
OS493_019045-T1
OS493_019046-T1NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED
OS493_019047-T1
OS493_019048-T1NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED
OS493_019049-T1NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED
OS493_019050-T1
OS493_019051-T1UNCHARACTERIZED
OS493_019052-T1UNCHARACTERIZED
OS493_019053-T1KELCH REPEAT AND BTB DOMAIN-CONTAINING PROTEIN 13-RELATED
OS493_019054-T1WD-REPEAT PROTEIN 18
OS493_019055-T1
OS493_019056-T1RADIAL SPOKE HEAD 1 HOMOLOG
OS493_019057-T1CYTOKINE RECEPTOR
OS493_019058-T1PROTEIN SIDEKICK
OS493_019059-T1PROTEIN SIDEKICK
OS493_019060-T1BASIGIN RELATED
OS493_019063-T1NEUROTRANSMITTER GATED ION CHANNEL
OS493_019064-T1NEUROTRANSMITTER GATED ION CHANNEL
OS493_019065-T1NEUROTRANSMITTER GATED ION CHANNEL
OS493_019066-T1NEUROTRANSMITTER GATED ION CHANNEL
OS493_019067-T1
OS493_019069-T1MYND-TYPE DOMAIN-CONTAINING PROTEIN
OS493_019070-T1
OS493_019071-T1
OS493_019072-T1NEUROTRANSMITTER GATED ION CHANNEL
OS493_019073-T1MYND-TYPE DOMAIN-CONTAINING PROTEIN
OS493_019074-T1
OS493_019075-T1
OS493_019076-T1
OS493_019077-T1NEUROTRANSMITTER GATED ION CHANNEL
OS493_019079-T1
OS493_019080-T1
OS493_019082-T1
OS493_019083-T1
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