About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 347 348 349 350 351 352 353 354 355 356 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_018923-T1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
OS493_018924-T1DNAJ HOMOLOG SUBFAMILY C MEMBER 5 HOMOLOG
OS493_018925-T1
OS493_018926-T1UNCHARACTERIZED
OS493_018927-T1MITOTIC-SPINDLE ORGANIZING PROTEIN 1
OS493_018928-T1ACETYL-COA C-ACYLTRANSFERASE
OS493_018929-T1TRNA METHYLTRANSFERASE
OS493_018930-T1
OS493_018931-T1THIAMINE PYROPHOSPHATE ENZYMES
OS493_018932-T1INTELECTIN
OS493_018933-T1PDZ DOMAIN CONTAINING PROTEIN
OS493_018934-T1
OS493_018935-T1
OS493_018936-T11,4-ALPHA-GLUCAN-BRANCHING ENZYME
OS493_018937-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
OS493_018938-T1
OS493_018939-T1
OS493_018940-T1CRUMBS FAMILY MEMBER
OS493_018941-T1
OS493_018943-T1THROMBOSPONDIN
OS493_018944-T1GLR0591 PROTEIN
OS493_018945-T1GLR0591 PROTEIN
OS493_018947-T1GLR0591 PROTEIN
OS493_018949-T1INTELECTIN
OS493_018950-T1
OS493_018951-T1INTELECTIN
OS493_018953-T1CNH DOMAIN CONTAINING
OS493_018954-T1ADHESION G-PROTEIN COUPLED RECEPTOR
OS493_018955-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED
OS493_018956-T1
OS493_018957-T1OLIGOPEPTIDE TRANSPORTER-RELATED
OS493_018958-T1PR DOMAIN ZINC FINGER PROTEIN
OS493_018959-T1IONOTROPIC GLUTAMATE RECEPTOR
OS493_018960-T1METABOTROPIC GLUTAMATE RECEPTOR
OS493_018961-T1IONOTROPIC GLUTAMATE RECEPTOR
OS493_018962-T1INTELECTIN
OS493_018963-T1INTELECTIN
OS493_018964-T1
OS493_018965-T1INTELECTIN
OS493_018966-T1
OS493_018967-T1INTELECTIN
OS493_018968-T1INTELECTIN
OS493_018969-T1INTELECTIN
OS493_018970-T1
OS493_018971-T1OLIGOPEPTIDE TRANSPORTER-RELATED
OS493_018972-T1OLIGOPEPTIDE TRANSPORTER-RELATED
OS493_018973-T1OLIGOPEPTIDE TRANSPORTER-RELATED
OS493_018974-T1OLIGOPEPTIDE TRANSPORTER-RELATED
OS493_018975-T1
OS493_018976-T1
TOP