Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s037.g0190.t1 | CLE |
| Lsat_s037.g0191.t1 | |
| Lsat_s037.g0192.t1 | |
| Lsat_s037.g0193.t1 | VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL |
| Lsat_s037.g0194.t1 | |
| Lsat_s037.g0195.t1 | |
| Lsat_s037.g0196.t1 | |
| Lsat_s037.g0197.t1 | |
| Lsat_s037.g0198.t1 | |
| Lsat_s037.g0199.t1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| Lsat_s037.g0200.t1 | AUTOPHAGY-RELATED 2, ISOFORM A |
| Lsat_s037.g0201.t1 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Lsat_s037.g0202.t1 | RIKEN CDNA 4932415D10 GENE |
| Lsat_s037.g0203.t1 | AUTOPHAGY-RELATED 2, ISOFORM A |
| Lsat_s037.g0204.t1 | AUTOPHAGY-RELATED 2, ISOFORM A |
| Lsat_s037.g0205.t1 | 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED |
| Lsat_s037.g0206.t1 | |
| Lsat_s037.g0207.t1 | |
| Lsat_s037.g0208.t1 | AP COMPLEX SUBUNIT MU |
| Lsat_s037.g0209.t1 | GDP-D-GLUCOSE PHOSPHORYLASE 1 |
| Lsat_s037.g0210.t1 | BRISC AND BRCA1-A COMPLEX MEMBER 2 |
| Lsat_s037.g0211.t1 | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 |
| Lsat_s037.g0212.t1 | |
| Lsat_s037.g0213.t1 | |
| Lsat_s037.g0214.t1 | GLYCOSYLTRANSFERASE-RELATED |
| Lsat_s037.g0215.t1 | COILED-COIL DOMAIN-CONTAINING 166 |
| Lsat_s037.g0216.t1 | ADENOSINE/GUANOSINE DIPHOSPHATASE |
| Lsat_s037.g0217.t1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER |
| Lsat_s037.g0218.t1 | DYNEIN REGULATORY COMPLEX PROTEIN 8 |
| Lsat_s037.g0219.t1 | ENOYL-COA HYDRATASE |
| Lsat_s037.g0220.t1 | ENOYL-COA HYDRATASE |
| Lsat_s037.g0221.t1 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED |
| Lsat_s037.g0222.t1 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED |
| Lsat_s037.g0223.t1 | |
| Lsat_s037.g0224.t1 | HEDGEHOG-INTERACTING PROTEIN |
| Lsat_s037.g0225.t1 | MOLTING PROTEIN MLT-4 |
| Lsat_s037.g0226.t1 | GLUTAREDOXIN FAMILY MEMBER |
| Lsat_s037.g0227.t1 | |
| Lsat_s037.g0228.t1 | |
| Lsat_s037.g0229.t1 | |
| Lsat_s037.g0230.t1 | |
| Lsat_s037.g0231.t1 | |
| Lsat_s037.g0232.t1 | |
| Lsat_s037.g0233.t1 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
| Lsat_s037.g0234.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
| Lsat_s037.g0235.t1 | |
| Lsat_s037.g0236.t1 | BLR2807 PROTEIN |
| Lsat_s037.g0237.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
| Lsat_s037.g0238.t1 | UPF0764 PROTEIN C16ORF89 |
| Lsat_s037.g0239.t1 | CHITINASE |
