About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s038.g0018.t1
Lsat_s038.g0019.t1ABC TRANSPORTER B FAMILY
Lsat_s038.g0020.t1ABC TRANSPORTER B FAMILY
Lsat_s038.g0021.t1ABC TRANSPORTER B FAMILY
Lsat_s038.g0022.t1ATP-BINDING CASSETTE SUB-FAMILY B
Lsat_s038.g0023.t1OS10G0105400 PROTEIN
Lsat_s038.g0024.t1
Lsat_s038.g0025.t1
Lsat_s038.g0026.t1
Lsat_s038.g0027.t1COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN
Lsat_s038.g0028.t1
Lsat_s038.g0029.t1
Lsat_s038.g0030.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Lsat_s038.g0031.t1SERINE/THREONINE-PROTEIN KINASE
Lsat_s038.g0032.t1RAS LIKE FAMILY 10 MEMBER B-RELATED
Lsat_s038.g0033.t1
Lsat_s038.g0034.t1HIGH-AFFINITY CHOLINE TRANSPORTER 1
Lsat_s038.g0035.t1
Lsat_s038.g0036.t1
Lsat_s038.g0037.t1WSCD FAMILY MEMBER CG9164
Lsat_s038.g0038.t1
Lsat_s038.g0039.t1WSCD FAMILY MEMBER CG9164
Lsat_s038.g0040.t1
Lsat_s038.g0041.t1WSCD FAMILY MEMBER CG9164
Lsat_s038.g0042.t1
Lsat_s038.g0043.t1BONUS, ISOFORM C-RELATED
Lsat_s038.g0044.t1
Lsat_s038.g0045.t1
Lsat_s038.g0046.t1MITOGEN-ACTIVATED PROTEIN KINASE
Lsat_s038.g0047.t1KINESIN-RELATED
Lsat_s038.g0048.t1COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2/NUR77
Lsat_s038.g0049.t1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Lsat_s038.g0050.t1
Lsat_s038.g0051.t1
Lsat_s038.g0052.t1DNA REPAIR PROTEIN RAD9
Lsat_s038.g0053.t1VACUOLAR SORTING PROTEIN VPS29
Lsat_s038.g0054.t1TRANSMEMBRANE PROTEIN 218
Lsat_s038.g0055.t1
Lsat_s038.g0056.t1BLR2807 PROTEIN
Lsat_s038.g0057.t1
Lsat_s038.g0058.t1BLR2807 PROTEIN
Lsat_s038.g0059.t1
Lsat_s038.g0060.t1BLR2807 PROTEIN
Lsat_s038.g0061.t1BLR2807 PROTEIN
Lsat_s038.g0062.t1HUNTINGTIN INTERACTING PROTEIN 1
Lsat_s038.g0063.t1
Lsat_s038.g0064.t1BCL7 RELATED
Lsat_s038.g0065.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s038.g0066.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s038.g0067.t1
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