Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s038.g0118.t1 | MULTIDRUG RESISTANCE PROTEIN |
Lsat_s038.g0119.t1 | |
Lsat_s038.g0120.t1 | |
Lsat_s038.g0121.t1 | |
Lsat_s038.g0122.t1 | |
Lsat_s038.g0123.t1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Lsat_s038.g0124.t1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Lsat_s038.g0125.t1 | STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1 |
Lsat_s038.g0126.t1 | MYOTUBULARIN-RELATED |
Lsat_s038.g0127.t1 | SERINE/THREONINE-PROTEIN KINASE TAO1-LIKE PROTEIN |
Lsat_s038.g0128.t1 | DNAJ HOMOLOG SUBFAMILY C MEMBER |
Lsat_s038.g0129.t1 | |
Lsat_s038.g0130.t1 | MITOGEN-ACTIVATED PROTEIN KINASE |
Lsat_s038.g0131.t1 | |
Lsat_s038.g0132.t1 | PROTEASE M14 CARBOXYPEPTIDASE |
Lsat_s038.g0133.t1 | OS10G0105400 PROTEIN |
Lsat_s038.g0134.t1 | OS10G0105400 PROTEIN |
Lsat_s038.g0135.t1 | MYOINOSITOL OXYGENASE |
Lsat_s038.g0136.t1 | MYOINOSITOL OXYGENASE |
Lsat_s038.g0137.t1 | |
Lsat_s038.g0138.t1 | UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED |
Lsat_s038.g0139.t1 | |
Lsat_s038.g0140.t1 | |
Lsat_s038.g0141.t1 | TUDOR DOMAIN CONTAINING PROTEIN |
Lsat_s038.g0142.t1 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
Lsat_s038.g0143.t1 | SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3 |
Lsat_s038.g0144.t1 | |
Lsat_s038.g0145.t1 | ARMADILLO-TYPE FOLD-RELATED |
Lsat_s038.g0146.t1 | |
Lsat_s038.g0147.t1 | ARMADILLO-TYPE FOLD-RELATED |
Lsat_s038.g0148.t1 | ARMADILLO-TYPE FOLD-RELATED |
Lsat_s038.g0149.t1 | ARMADILLO-TYPE FOLD-RELATED |
Lsat_s038.g0150.t1 | ARMADILLO-TYPE FOLD-RELATED |
Lsat_s038.g0151.t1 | |
Lsat_s038.g0152.t1 | |
Lsat_s038.g0153.t1 | ARMADILLO-TYPE FOLD-RELATED |
Lsat_s038.g0154.t1 | ARMADILLO-TYPE FOLD-RELATED |
Lsat_s038.g0155.t1 | ARMADILLO-TYPE FOLD-RELATED |
Lsat_s038.g0156.t1 | GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1-LIKE |
Lsat_s038.g0157.t1 | ARMADILLO-TYPE FOLD-RELATED |
Lsat_s038.g0158.t1 | ARMADILLO-TYPE FOLD-RELATED |
Lsat_s038.g0159.t1 | |
Lsat_s038.g0160.t1 | ARMADILLO-TYPE FOLD-RELATED |
Lsat_s038.g0161.t1 | ARMADILLO-TYPE FOLD-RELATED |
Lsat_s038.g0162.t1 | |
Lsat_s038.g0163.t1 | |
Lsat_s038.g0164.t1 | |
Lsat_s038.g0165.t1 | |
Lsat_s038.g0166.t1 | |
Lsat_s038.g0167.t1 |