About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s038.g0068.t1LIPASE
Lsat_s038.g0069.t1CARBOXYLESTERASE
Lsat_s038.g0070.t1
Lsat_s038.g0071.t1
Lsat_s038.g0072.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s038.g0073.t1
Lsat_s038.g0074.t1
Lsat_s038.g0075.t1
Lsat_s038.g0076.t1
Lsat_s038.g0077.t1MUCIN 4-RELATED
Lsat_s038.g0078.t1
Lsat_s038.g0079.t1
Lsat_s038.g0080.t1MUCIN 4-RELATED
Lsat_s038.g0081.t1
Lsat_s038.g0082.t1
Lsat_s038.g0083.t1MUCIN 4-RELATED
Lsat_s038.g0084.t1VESICLE PROTEIN SORTING-ASSOCIATED
Lsat_s038.g0085.t1TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
Lsat_s038.g0086.t1MAX DIMERIZATION, MAD
Lsat_s038.g0087.t1TRANSMEMBRANE PROTEIN 248-LIKE
Lsat_s038.g0088.t1
Lsat_s038.g0089.t1ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 1
Lsat_s038.g0090.t1
Lsat_s038.g0091.t1
Lsat_s038.g0092.t1T-BOX PROTEIN-RELATED
Lsat_s038.g0093.t1
Lsat_s038.g0094.t1GTPASE ERA
Lsat_s038.g0095.t1DNA-DIRECTED RNA POLYMERASE I,II,III
Lsat_s038.g0096.t1
Lsat_s038.g0097.t1
Lsat_s038.g0098.t1
Lsat_s038.g0099.t1N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED
Lsat_s038.g0100.t1WD-40 REPEAT PROTEIN
Lsat_s038.g0101.t1
Lsat_s038.g0102.t1GEO07735P1-RELATED-RELATED
Lsat_s038.g0103.t1MOLTING PROTEIN MLT-4
Lsat_s038.g0104.t1UNCHARACTERIZED
Lsat_s038.g0105.t1
Lsat_s038.g0106.t1
Lsat_s038.g0107.t1
Lsat_s038.g0108.t1SERINE/THREONINE PROTEIN PHOSPHATASE
Lsat_s038.g0109.t1SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED
Lsat_s038.g0110.t1FRUCTOSE-BISPHOSPHATE ALDOLASE
Lsat_s038.g0111.t1STANNIOCALCIN
Lsat_s038.g0112.t1PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
Lsat_s038.g0113.t1
Lsat_s038.g0114.t1MULTIDRUG RESISTANCE PROTEIN
Lsat_s038.g0115.t1
Lsat_s038.g0116.t1MULTIDRUG RESISTANCE PROTEIN
Lsat_s038.g0117.t1
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