About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s038.g0218.t1
Lsat_s039.g0001.t1
Lsat_s039.g0002.t1
Lsat_s039.g0003.t1
Lsat_s039.g0004.t1OXYGENASE-RELATED
Lsat_s039.g0005.t1ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
Lsat_s039.g0006.t1
Lsat_s039.g0007.t1DER1-LIKE PROTEIN, DERLIN
Lsat_s039.g0008.t1BREAST CANCER METASTASIS-SUPPRESSOR 1
Lsat_s039.g0009.t1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Lsat_s039.g0010.t1SIGNAL PEPTIDE PEPTIDASE
Lsat_s039.g0011.t1
Lsat_s039.g0012.t1
Lsat_s039.g0013.t1
Lsat_s039.g0014.t1
Lsat_s039.g0015.t1CARBONIC ANHYDRASE
Lsat_s039.g0016.t1CARBONIC ANHYDRASE
Lsat_s039.g0017.t1
Lsat_s039.g0018.t1CARBONIC ANHYDRASE
Lsat_s039.g0019.t1CARBONIC ANHYDRASE
Lsat_s039.g0020.t1CARBONIC ANHYDRASE
Lsat_s039.g0021.t1
Lsat_s039.g0022.t1CARBONIC ANHYDRASE
Lsat_s039.g0023.t1CARBONIC ANHYDRASE
Lsat_s039.g0024.t1
Lsat_s039.g0025.t1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
Lsat_s039.g0026.t1CARBONIC ANHYDRASE
Lsat_s039.g0027.t1CARBONIC ANHYDRASE
Lsat_s039.g0028.t1
Lsat_s039.g0029.t1CARBONIC ANHYDRASE
Lsat_s039.g0030.t1RRNA METHYLTRANSFERASE 1, MITOCHONDRIAL
Lsat_s039.g0031.t1RRNA METHYLTRANSFERASE 1, MITOCHONDRIAL
Lsat_s039.g0032.t1
Lsat_s039.g0033.t1DYNACTIN 1-RELATED MICROTUBULE-BINDING
Lsat_s039.g0034.t1
Lsat_s039.g0035.t1
Lsat_s039.g0036.t1
Lsat_s039.g0037.t1PROTEIN CBG26694
Lsat_s039.g0038.t1
Lsat_s039.g0039.t1
Lsat_s039.g0040.t1
Lsat_s039.g0041.t1
Lsat_s039.g0042.t1
Lsat_s039.g0043.t1
Lsat_s039.g0044.t1
Lsat_s039.g0045.t1
Lsat_s039.g0046.t1
Lsat_s039.g0047.t1TRANSMEMBRANE PROTEIN 199
Lsat_s039.g0048.t1SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT
Lsat_s039.g0049.t1LEUCINE ZIPPER CONTAINING TRANSCRIPTION FACTOR LZF1
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