Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s039.g0100.t1 | RE45066P-RELATED |
| Lsat_s039.g0101.t1 | RE45066P-RELATED |
| Lsat_s039.g0102.t1 | |
| Lsat_s039.g0103.t1 | |
| Lsat_s039.g0104.t1 | |
| Lsat_s039.g0105.t1 | |
| Lsat_s039.g0106.t1 | PROTEIN CBG06927 |
| Lsat_s039.g0107.t1 | CDC45-RELATED PROTEIN |
| Lsat_s039.g0108.t1 | UBIQUITIN FUSION DEGRADATON PROTEIN 1 |
| Lsat_s039.g0109.t1 | |
| Lsat_s039.g0110.t1 | |
| Lsat_s039.g0111.t1 | |
| Lsat_s039.g0112.t1 | |
| Lsat_s039.g0113.t1 | |
| Lsat_s039.g0114.t1 | G-PROTEIN COUPLED RECEPTOR 143 |
| Lsat_s039.g0115.t1 | PRE-MRNA SPLICING FACTOR PRP8 |
| Lsat_s039.g0116.t1 | THIOSULFATE SULFERTANSFERASE |
| Lsat_s039.g0117.t1 | |
| Lsat_s039.g0118.t1 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
| Lsat_s039.g0119.t1 | |
| Lsat_s039.g0120.t1 | THIOESTERASE |
| Lsat_s039.g0121.t1 | THIOESTERASE |
| Lsat_s039.g0122.t1 | THIOESTERASE |
| Lsat_s039.g0123.t1 | THIOESTERASE |
| Lsat_s039.g0124.t1 | |
| Lsat_s039.g0125.t1 | |
| Lsat_s039.g0126.t1 | |
| Lsat_s039.g0127.t1 | |
| Lsat_s039.g0128.t1 | AMYLOID PROTEIN-BINDING PROTEIN 2 |
| Lsat_s039.g0129.t1 | NUCLEOLAR COMPLEX PROTEIN 4 |
| Lsat_s039.g0130.t1 | HELICASE SRCAP-RELATED |
| Lsat_s039.g0131.t1 | E1A-BINDING PROTEIN P400-RELATED |
| Lsat_s039.g0132.t1 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Lsat_s039.g0133.t1 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Lsat_s039.g0134.t1 | SI:DKEY-261L7.2 |
| Lsat_s039.g0135.t1 | TEKTIN |
| Lsat_s039.g0136.t1 | SUCCINATE/FUMARATE MITOCHONDRIAL TRANSPORTER-RELATED |
| Lsat_s039.g0137.t1 | UNCHARACTERIZED |
| Lsat_s039.g0138.t1 | MALIC ENZYME-RELATED |
| Lsat_s039.g0139.t1 | COPINE FAMILY PROTEIN 1 |
| Lsat_s039.g0140.t1 | |
| Lsat_s039.g0141.t1 | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED |
| Lsat_s039.g0142.t1 | CYTOCHROME B5 |
| Lsat_s039.g0143.t1 | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED |
| Lsat_s039.g0144.t1 | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED |
| Lsat_s039.g0145.t1 | |
| Lsat_s039.g0146.t1 | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED |
| Lsat_s039.g0147.t1 | 5-HYDROXYTRYPTAMINE RECEPTOR |
| Lsat_s039.g0148.t1 | |
| Lsat_s039.g0149.t1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 157 |
