About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s039.g0050.t1PROLINE OXIDASE
Lsat_s039.g0051.t1
Lsat_s039.g0052.t1MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22
Lsat_s039.g0053.t1F-BOX ONLY PROTEIN 3
Lsat_s039.g0054.t1PHOSPHATIDYLSERINE DECARBOXYLASE
Lsat_s039.g0055.t1PROTEIN ANKUB1
Lsat_s039.g0056.t1PHOSPHOGLYCERATE MUTASE-RELATED
Lsat_s039.g0057.t1
Lsat_s039.g0058.t1BETA TRANSDUCIN-RELATED PROTEIN
Lsat_s039.g0059.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s039.g0060.t1
Lsat_s039.g0061.t1
Lsat_s039.g0062.t1
Lsat_s039.g0063.t1CENTROSOMAL PROTEIN OF 78 KDA
Lsat_s039.g0064.t1
Lsat_s039.g0065.t1
Lsat_s039.g0066.t1
Lsat_s039.g0067.t1
Lsat_s039.g0068.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s039.g0069.t1
Lsat_s039.g0070.t1
Lsat_s039.g0071.t1SAM-DEPENDENT METHYLTRANSFERASE
Lsat_s039.g0072.t1WD REPEAT-CONTAINING PROTEIN POP1
Lsat_s039.g0073.t1CYTOCHROME C OXIDASE POLYPEPTIDE VIA
Lsat_s039.g0074.t1
Lsat_s039.g0075.t1CYTOCHROME C OXIDASE POLYPEPTIDE VIA
Lsat_s039.g0076.t1PLASMINOGEN-RELATED
Lsat_s039.g0077.t1COILIN
Lsat_s039.g0078.t1
Lsat_s039.g0079.t1A-KINASE ANCHOR PROTEINS
Lsat_s039.g0080.t1SERINE/THREONINE-PROTEIN KINASE
Lsat_s039.g0081.t1LEUCINE RICH REPEAT FAMILY PROTEIN
Lsat_s039.g0082.t1CULLIN
Lsat_s039.g0083.t1DNA REPAIR PROTEIN RAD51 HOMOLOG 4
Lsat_s039.g0084.t1TRANSLATIONAL ACTIVATOR GCN1-RELATED
Lsat_s039.g0085.t1
Lsat_s039.g0086.t1SWIM-TYPE DOMAIN-CONTAINING PROTEIN
Lsat_s039.g0087.t1PROTEIN CBG06927
Lsat_s039.g0088.t1
Lsat_s039.g0089.t1
Lsat_s039.g0090.t1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Lsat_s039.g0091.t1
Lsat_s039.g0092.t1
Lsat_s039.g0093.t1RE45066P-RELATED
Lsat_s039.g0094.t1
Lsat_s039.g0095.t1RE45066P-RELATED
Lsat_s039.g0096.t1
Lsat_s039.g0097.t1
Lsat_s039.g0098.t1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Lsat_s039.g0099.t1COLLAGEN ALPHA
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