About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s039.g0150.t1RING ZINC FINGER
Lsat_s039.g0151.t1
Lsat_s039.g0152.t1
Lsat_s039.g0153.t1
Lsat_s039.g0154.t1WD40 REPEAT PROTEIN
Lsat_s039.g0155.t139S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL
Lsat_s039.g0156.t1
Lsat_s039.g0157.t1
Lsat_s039.g0158.t1PHOSPHATIDYLINOSITOL SYNTHASE
Lsat_s039.g0159.t1
Lsat_s039.g0160.t1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Lsat_s039.g0161.t1
Lsat_s039.g0162.t1
Lsat_s039.g0163.t1N-LYSINE METHYLTRANSFERASE KMT5A
Lsat_s039.g0164.t1STRAWBERRY NOTCH-RELATED
Lsat_s039.g0165.t1COILED-COIL DOMAIN-CONTAINING 74A
Lsat_s039.g0166.t1UNCHARACTERIZED
Lsat_s039.g0167.t1
Lsat_s039.g0168.t1INNEXIN
Lsat_s039.g0169.t1INNEXIN
Lsat_s039.g0170.t1
Lsat_s039.g0171.t1
Lsat_s039.g0172.t1INNEXIN
Lsat_s039.g0173.t1
Lsat_s039.g0174.t1
Lsat_s039.g0175.t1
Lsat_s039.g0176.t1
Lsat_s039.g0177.t1
Lsat_s039.g0178.t1MACROGLOBULIN / COMPLEMENT
Lsat_s039.g0179.t1
Lsat_s039.g0180.t1MACROGLOBULIN / COMPLEMENT
Lsat_s039.g0181.t1MACROGLOBULIN / COMPLEMENT
Lsat_s039.g0182.t1
Lsat_s039.g0183.t1MACROGLOBULIN / COMPLEMENT
Lsat_s039.g0184.t1TRANSMEMBRANE PROTEIN
Lsat_s039.g0185.t1NEP1/MRA1
Lsat_s039.g0186.t1
Lsat_s039.g0187.t1DET1 HOMOLOG DE-ETIOLATED-1 HOMOLOG
Lsat_s039.g0188.t1
Lsat_s039.g0189.t1
Lsat_s039.g0190.t1DET1 HOMOLOG DE-ETIOLATED-1 HOMOLOG
Lsat_s039.g0191.t1NHL REPEAT-CONTAINING PROTEIN-RELATED
Lsat_s039.g0192.t1
Lsat_s039.g0193.t1RPA-INTERACTING PROTEIN RPAIN
Lsat_s039.g0194.t1SH2B ADAPTER PROTEIN
Lsat_s039.g0195.t1SEPTIN
Lsat_s039.g0196.t1GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
Lsat_s039.g0197.t1GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
Lsat_s039.g0198.t1MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED
Lsat_s039.g0199.t1DIPHTHAMIDE BIOSYNTHESIS PROTEIN
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