About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s040.g0071.t1
Lsat_s040.g0072.t1
Lsat_s040.g0073.t1
Lsat_s040.g0074.t1
Lsat_s040.g0075.t1DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
Lsat_s040.g0076.t1TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN34-RELATED
Lsat_s040.g0077.t1F-BOX ONLY PROTEIN 5 AND 43
Lsat_s040.g0078.t1EXOCYST COMPLEX COMPONENT SEC6-RELATED
Lsat_s040.g0079.t1GLUCOCORTICOID MODULATORY ELEMENT-BINDING PROTEIN
Lsat_s040.g0080.t1NADP-SPECIFIC ISOCITRATE DEHYDROGENASE
Lsat_s040.g0081.t1NAD(P) TRANSHYDROGENASE
Lsat_s040.g0082.t1
Lsat_s040.g0083.t1
Lsat_s040.g0084.t1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Lsat_s040.g0085.t1
Lsat_s040.g0086.t1LIPASE
Lsat_s040.g0087.t1UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX ASSEMBLY FACTOR 1 FAMILY MEMBER
Lsat_s040.g0088.t1RCC1-LIKE G EXCHANGING FACTOR-LIKE PROTEIN
Lsat_s040.g0089.t1
Lsat_s040.g0090.t1CGI-12 PROTEIN-RELATED
Lsat_s040.g0091.t1TGF-BETA FAMILY
Lsat_s040.g0092.t1GLUTAMINASE
Lsat_s040.g0093.t1
Lsat_s040.g0094.t1ZGC:136858
Lsat_s040.g0095.t1EG:80H7.2 PROTEIN
Lsat_s040.g0096.t1EG:80H7.2 PROTEIN
Lsat_s040.g0097.t1EG:80H7.2 PROTEIN
Lsat_s040.g0098.t1ZGC:136858
Lsat_s040.g0099.t1
Lsat_s040.g0100.t1
Lsat_s040.g0101.t1
Lsat_s040.g0102.t1TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2
Lsat_s040.g0103.t1FRIZZLED
Lsat_s040.g0104.t1
Lsat_s040.g0105.t1
Lsat_s040.g0106.t1
Lsat_s040.g0107.t1
Lsat_s040.g0108.t13-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED
Lsat_s040.g0109.t1CCAAT/ENHANCER BINDING PROTEIN
Lsat_s040.g0110.t1
Lsat_s040.g0111.t1
Lsat_s040.g0112.t1
Lsat_s040.g0113.t1CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
Lsat_s040.g0114.t1ATILLA, ISOFORM B-RELATED-RELATED
Lsat_s040.g0115.t1
Lsat_s040.g0116.t1
Lsat_s040.g0117.t1
Lsat_s040.g0118.t1
Lsat_s040.g0119.t1HISTIDINE-RICH GLYCOPROTEIN
Lsat_s040.g0120.t1
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