About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s039.g0200.t1BLR2807 PROTEIN
Lsat_s039.g0201.t1BLR2807 PROTEIN
Lsat_s039.g0202.t1CT120 PROTEIN
Lsat_s039.g0203.t1BLR2807 PROTEIN
Lsat_s039.g0204.t1
Lsat_s039.g0205.t1ANKYRIN REPEAT PROTEIN
Lsat_s039.g0206.t1RING FINGER 10 FAMILY MEMBER
Lsat_s039.g0207.t1
Lsat_s039.g0208.t1COLLAGEN ALPHA
Lsat_s039.g0209.t1
Lsat_s039.g0210.t1PROTEIN CBG23764
Lsat_s039.g0211.t1
Lsat_s039.g0212.t1
Lsat_s039.g0213.t1INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Lsat_s039.g0214.t1
Lsat_s039.g0215.t1
Lsat_s039.g0216.t1
Lsat_s039.g0217.t1
Lsat_s039.g0218.t1
Lsat_s039.g0219.t1
Lsat_s039.g0220.t1
Lsat_s039.g0221.t1
Lsat_s039.g0222.t1REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT
Lsat_s039.g0223.t1SERINE-THREONINE PROTEIN KINASE
Lsat_s039.g0224.t1SERINE/THREONINE/TYROSINE-INTERACTING-LIKE PROTEIN 1
Lsat_s039.g0225.t1-
Lsat_s039.g0226.t1
Lsat_s039.g0227.t1
Lsat_s039.g0228.t1
Lsat_s039.g0229.t1
Lsat_s040.g0001.t1
Lsat_s040.g0002.t1
Lsat_s040.g0003.t1
Lsat_s040.g0004.t1UNCHARACTERIZED
Lsat_s040.g0005.t1ELECTRON TRANSPORT OXIDOREDUCTASE
Lsat_s040.g0006.t1CRUMBS FAMILY MEMBER
Lsat_s040.g0007.t1
Lsat_s040.g0008.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Lsat_s040.g0009.t1
Lsat_s040.g0010.t1
Lsat_s040.g0011.t1
Lsat_s040.g0012.t1
Lsat_s040.g0013.t1
Lsat_s040.g0014.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Lsat_s040.g0015.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Lsat_s040.g0016.t1
Lsat_s040.g0017.t1
Lsat_s040.g0018.t1
Lsat_s040.g0019.t1
Lsat_s040.g0020.t1
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