About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s040.g0021.t1
Lsat_s040.g0022.t1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Lsat_s040.g0023.t1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Lsat_s040.g0024.t1ANGIOTENSIN-CONVERTING ENZYME
Lsat_s040.g0025.t1
Lsat_s040.g0026.t1UNCHARACTERIZED
Lsat_s040.g0027.t1HL01030P-RELATED
Lsat_s040.g0028.t1SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED
Lsat_s040.g0029.t1
Lsat_s040.g0030.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s040.g0031.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s040.g0032.t1CRUMBS FAMILY MEMBER
Lsat_s040.g0033.t1
Lsat_s040.g0034.t1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Lsat_s040.g0035.t1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Lsat_s040.g0036.t1CRUMBS FAMILY MEMBER
Lsat_s040.g0037.t1CRUMBS FAMILY MEMBER
Lsat_s040.g0038.t1-
Lsat_s040.g0039.t1
Lsat_s040.g0040.t1
Lsat_s040.g0041.t1ALPHA-AMYLASE FAMILY MEMBER
Lsat_s040.g0042.t1
Lsat_s040.g0043.t1
Lsat_s040.g0044.t1
Lsat_s040.g0045.t1
Lsat_s040.g0046.t1
Lsat_s040.g0047.t1
Lsat_s040.g0048.t1
Lsat_s040.g0049.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s040.g0050.t1
Lsat_s040.g0051.t1NUCLEAR RESPIRATORY FACTOR 1
Lsat_s040.g0052.t1
Lsat_s040.g0053.t1
Lsat_s040.g0054.t1
Lsat_s040.g0055.t1GABA-B RECEPTOR
Lsat_s040.g0056.t1
Lsat_s040.g0057.t1
Lsat_s040.g0058.t1ZINC FINGER PROTEIN
Lsat_s040.g0059.t1
Lsat_s040.g0060.t1URINARY PROTEIN RUP /ACROSOMAL PROTEIN SP-10
Lsat_s040.g0061.t1VOLTAGE-GATED POTASSIUM CHANNEL
Lsat_s040.g0062.t1
Lsat_s040.g0063.t1GEO11419P1
Lsat_s040.g0064.t1
Lsat_s040.g0065.t1
Lsat_s040.g0066.t1VOLTAGE-GATED POTASSIUM CHANNEL
Lsat_s040.g0067.t1
Lsat_s040.g0068.t1-
Lsat_s040.g0069.t1
Lsat_s040.g0070.t1
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