Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s037.g0040.t1 | |
Lsat_s037.g0041.t1 | IGGFC_BINDING DOMAIN-CONTAINING PROTEIN |
Lsat_s037.g0042.t1 | USP DOMAIN-CONTAINING PROTEIN |
Lsat_s037.g0043.t1 | |
Lsat_s037.g0044.t1 | NEUROENDOCRINE PROTEIN 7B2 |
Lsat_s037.g0045.t1 | BEIGE/BEACH-RELATED |
Lsat_s037.g0046.t1 | HOMEOBOX PROTEIN |
Lsat_s037.g0047.t1 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
Lsat_s037.g0048.t1 | ARGINASE |
Lsat_s037.g0049.t1 | |
Lsat_s037.g0050.t1 | TYROSINASE FAMILY MEMBER |
Lsat_s037.g0051.t1 | TYROSINASE FAMILY MEMBER |
Lsat_s037.g0052.t1 | |
Lsat_s037.g0053.t1 | |
Lsat_s037.g0054.t1 | |
Lsat_s037.g0055.t1 | |
Lsat_s037.g0056.t1 | TRANSMEMBRANE PROTEIN |
Lsat_s037.g0057.t1 | |
Lsat_s037.g0058.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s037.g0059.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s037.g0060.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s037.g0061.t1 | |
Lsat_s037.g0062.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s037.g0063.t1 | TRANSMEMBRANE PROTEIN |
Lsat_s037.g0064.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s037.g0065.t1 | KUNITZ-TYPE PROTEASE INHIBITOR-RELATED |
Lsat_s037.g0066.t1 | TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTOR |
Lsat_s037.g0067.t1 | |
Lsat_s037.g0068.t1 | SECRETED MODULAR CALCIUM-BINDING PROTEIN |
Lsat_s037.g0069.t1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
Lsat_s037.g0070.t1 | |
Lsat_s037.g0071.t1 | |
Lsat_s037.g0072.t1 | TRANSMEMBRANE PROTEIN 179 |
Lsat_s037.g0073.t1 | |
Lsat_s037.g0074.t1 | |
Lsat_s037.g0075.t1 | COLLAGEN ALPHA |
Lsat_s037.g0076.t1 | XANTHINE DEHYDROGENASE |
Lsat_s037.g0077.t1 | PUTATIVE-RELATED |
Lsat_s037.g0078.t1 | XANTHINE DEHYDROGENASE |
Lsat_s037.g0079.t1 | XANTHINE DEHYDROGENASE |
Lsat_s037.g0080.t1 | XANTHINE DEHYDROGENASE |
Lsat_s037.g0081.t1 | METHYLTRANSFERASE-LIKE PROTEIN 24 |
Lsat_s037.g0082.t1 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Lsat_s037.g0083.t1 | XANTHINE DEHYDROGENASE |
Lsat_s037.g0084.t1 | XANTHINE DEHYDROGENASE |
Lsat_s037.g0085.t1 | |
Lsat_s037.g0086.t1 | XANTHINE DEHYDROGENASE |
Lsat_s037.g0087.t1 | XANTHINE DEHYDROGENASE |
Lsat_s037.g0088.t1 | PA-PL1 PHOSPHOLIPASE FAMILY |
Lsat_s037.g0089.t1 |