About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s036.g0040.t1PHOSPHORYLASE B KINASE REGULATORY SUBUNIT
Lsat_s036.g0041.t1LEUCINE AMINOPEPTIDASE-RELATED
Lsat_s036.g0042.t1CORTACTIN AND DREBRIN
Lsat_s036.g0043.t1SOLUBLE NSF ATTACHMENT PROTEIN SNAP
Lsat_s036.g0044.t1LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2
Lsat_s036.g0045.t1KINESIN-LIKE PROTEIN KLP-3
Lsat_s036.g0046.t1GPI TRANSAMIDASE COMPONENT PIG-U
Lsat_s036.g0047.t1AGAP008228-PA
Lsat_s036.g0048.t1PALMITOYLTRANSFERASE ZDHHC16
Lsat_s036.g0049.t1
Lsat_s036.g0050.t1
Lsat_s036.g0051.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s036.g0052.t1
Lsat_s036.g0053.t1
Lsat_s036.g0054.t1
Lsat_s036.g0055.t1
Lsat_s036.g0056.t1
Lsat_s036.g0057.t1
Lsat_s036.g0058.t1
Lsat_s036.g0059.t1
Lsat_s036.g0060.t1CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Lsat_s036.g0061.t1PROTEIN C20ORF24 RAB5-INTERACTING PROTEIN
Lsat_s036.g0062.t1
Lsat_s036.g0063.t1
Lsat_s036.g0064.t1MISEXPRESSION SUPPRESSOR OF RAS 6
Lsat_s036.g0065.t1PROTEIN ARGININE N-METHYLTRANSFERASE 5
Lsat_s036.g0066.t1MRNA GUANINE-7- METHYLTRANSFERASE
Lsat_s036.g0067.t1
Lsat_s036.g0068.t1MRNA GUANINE-7- METHYLTRANSFERASE
Lsat_s036.g0069.t1UNCHARACTERIZED
Lsat_s036.g0070.t1SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
Lsat_s036.g0071.t1STAR-RELATED LIPID TRANSFER PROTEIN 9
Lsat_s036.g0072.t1
Lsat_s036.g0073.t1
Lsat_s036.g0074.t1
Lsat_s036.g0075.t1SODIUM/HYDROGEN EXCHANGER
Lsat_s036.g0076.t1
Lsat_s036.g0077.t1ADENOMATOSIS POLYPOSIS COLI DOWN-REGULATED 1
Lsat_s036.g0078.t1
Lsat_s036.g0079.t1BCDNA.GH03377
Lsat_s036.g0080.t1CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10
Lsat_s036.g0081.t1BONUS, ISOFORM C-RELATED
Lsat_s036.g0082.t1
Lsat_s036.g0083.t1CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Lsat_s036.g0084.t1CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Lsat_s036.g0085.t1CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Lsat_s036.g0086.t1CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Lsat_s036.g0087.t1MEMBRANE-ANCHORED JUNCTION PROTEIN MAJIN
Lsat_s036.g0088.t1ZINC FINGER PROTEIN
Lsat_s036.g0089.t16-PHOSPHOGLUCONATE DEHYDROGENASE
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