Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s035.g0145.t1 | - |
| Lsat_s035.g0146.t1 | |
| Lsat_s035.g0147.t1 | |
| Lsat_s035.g0148.t1 | ACROSIN-RELATED |
| Lsat_s035.g0149.t1 | UNCHARACTERIZED |
| Lsat_s035.g0150.t1 | |
| Lsat_s035.g0151.t1 | MAESTRO-RELATED HEAT DOMAIN-CONTAINING |
| Lsat_s035.g0152.t1 | S-FORMYLGLUTATHIONE HYDROLASE |
| Lsat_s035.g0153.t1 | |
| Lsat_s035.g0154.t1 | |
| Lsat_s035.g0155.t1 | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN |
| Lsat_s035.g0156.t1 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
| Lsat_s035.g0157.t1 | |
| Lsat_s035.g0158.t1 | PROTEIN CBG10425 |
| Lsat_s035.g0159.t1 | PROTEIN CBG10425 |
| Lsat_s035.g0160.t1 | APOPTOTIC CHROMATIN CONDENSATION INDUCER IN THE NUCLEUS |
| Lsat_s035.g0161.t1 | CENTROSOMAL PROTEIN OF 89 KDA |
| Lsat_s035.g0162.t1 | GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN |
| Lsat_s035.g0163.t1 | UNCHARACTERIZED |
| Lsat_s035.g0164.t1 | RING FINGER PROTEIN 31-RELATED |
| Lsat_s035.g0165.t1 | TRANSPOSON |
| Lsat_s035.g0166.t1 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
| Lsat_s035.g0167.t1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| Lsat_s035.g0168.t1 | GRB10 INTERACTING GYF PROTEIN |
| Lsat_s035.g0169.t1 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
| Lsat_s035.g0170.t1 | |
| Lsat_s035.g0171.t1 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
| Lsat_s035.g0172.t1 | |
| Lsat_s035.g0173.t1 | D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH |
| Lsat_s035.g0174.t1 | UNCHARACTERIZED |
| Lsat_s035.g0175.t1 | SUGAR NUCLEOTIDE EPIMERASE RELATED |
| Lsat_s035.g0176.t1 | ADAPTIN, ALPHA/GAMMA/EPSILON |
| Lsat_s035.g0177.t1 | |
| Lsat_s035.g0178.t1 | NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED |
| Lsat_s035.g0179.t1 | CENTROSOMAL PROTEIN OF 76 KDA |
| Lsat_s035.g0180.t1 | DUAL SPECIFICITY PROTEIN PHOSPHATASE DDB_G0269404-RELATED |
| Lsat_s035.g0181.t1 | |
| Lsat_s035.g0182.t1 | UNCHARACTERIZED |
| Lsat_s035.g0183.t1 | SI:CH211-262H13.3-RELATED-RELATED |
| Lsat_s035.g0184.t1 | |
| Lsat_s035.g0185.t1 | MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN |
| Lsat_s035.g0186.t1 | |
| Lsat_s035.g0187.t1 | CELL DIVISION PROTEIN KINASE |
| Lsat_s035.g0188.t1 | CARBOHYDRATE SULFOTRANSFERASE |
| Lsat_s035.g0189.t1 | AMINOTRANSFERASE CLASS V |
| Lsat_s035.g0190.t1 | |
| Lsat_s035.g0191.t1 | |
| Lsat_s035.g0192.t1 | TRANSMEMBRANE PROTEIN 107 |
| Lsat_s035.g0193.t1 | COATOMER |
| Lsat_s035.g0194.t1 |
