About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s034.g0122.t1
Lsat_s034.g0123.t1
Lsat_s034.g0124.t1
Lsat_s034.g0125.t1TRANSMEMBRANE PROTEIN 246
Lsat_s034.g0126.t1
Lsat_s034.g0127.t1
Lsat_s034.g0128.t1
Lsat_s034.g0129.t1MIX-TYPE HOMEOBOX GENE 1-RELATED
Lsat_s034.g0130.t1
Lsat_s034.g0131.t1GALACTOCEREBROSIDASE
Lsat_s034.g0132.t1
Lsat_s034.g0133.t1THO COMPLEX SUBUNIT 6 HOMOLOG
Lsat_s034.g0134.t1TETRATRICOPEPTIDE REPEAT PROTEIN 1
Lsat_s034.g0135.t1METHYL-CPG BINDING PROTEIN, DROSOPHILA
Lsat_s034.g0136.t1STEP II SPLICING FACTOR SLU7
Lsat_s034.g0137.t1NITRIC OXIDE-ASSOCIATED PROTEIN 1
Lsat_s034.g0138.t1USP DOMAIN-CONTAINING PROTEIN
Lsat_s034.g0139.t1TESTICULAR HAPLOID EXPRESSED GENE PROTEIN
Lsat_s034.g0140.t1HSPC111 PROTEIN-RELATED
Lsat_s034.g0141.t1HYPOXIA-INDUCBILE GENE 1 HIG1 -RELATED
Lsat_s034.g0142.t1ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 9-RELATED
Lsat_s034.g0143.t1
Lsat_s034.g0144.t1
Lsat_s034.g0145.t1
Lsat_s034.g0146.t1
Lsat_s034.g0147.t1DYNACTIN 1-RELATED MICROTUBULE-BINDING
Lsat_s034.g0148.t1
Lsat_s034.g0149.t1
Lsat_s034.g0150.t1
Lsat_s034.g0151.t1RHO FAMILY GTPASE
Lsat_s034.g0152.t1LIPASE MATURATION FACTOR
Lsat_s034.g0153.t140S RIBOSOMAL PROTEIN S3A
Lsat_s034.g0154.t1CORTACTIN AND DREBRIN
Lsat_s034.g0155.t1HERMANSKY-PUDLAK SYNDROME PROTEIN 1
Lsat_s034.g0156.t1
Lsat_s034.g0157.t1VERY KIND PROTEIN
Lsat_s034.g0158.t1CASEIN KINASE-RELATED
Lsat_s034.g0159.t1PA-PL1 PHOSPHOLIPASE FAMILY
Lsat_s034.g0160.t1UNCHARACTERIZED
Lsat_s034.g0161.t1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Lsat_s034.g0162.t1TETRASPANIN
Lsat_s034.g0163.t1PATCHED-RELATED
Lsat_s034.g0164.t1
Lsat_s034.g0165.t1
Lsat_s034.g0166.t1
Lsat_s034.g0167.t1
Lsat_s034.g0168.t1
Lsat_s034.g0169.t1DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Lsat_s034.g0170.t1
Lsat_s034.g0171.t1IONOTROPIC GLUTAMATE RECEPTOR
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