About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s034.g0072.t1BROMODOMAIN-CONTAINING PROTEIN 8
Lsat_s034.g0073.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT
Lsat_s034.g0074.t1RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Lsat_s034.g0075.t1
Lsat_s034.g0076.t1
Lsat_s034.g0077.t1
Lsat_s034.g0078.t1
Lsat_s034.g0079.t1HISTONE RNA HAIRPIN-BINDING PROTEIN
Lsat_s034.g0080.t1M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25
Lsat_s034.g0081.t1CLARIN
Lsat_s034.g0082.t1
Lsat_s034.g0083.t1
Lsat_s034.g0084.t1
Lsat_s034.g0085.t1
Lsat_s034.g0086.t1GH10160P
Lsat_s034.g0087.t1PROLINE-RICH NUCLEAR RECEPTOR COACTIVATOR
Lsat_s034.g0088.t1PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED
Lsat_s034.g0089.t1OS12G0117600 PROTEIN
Lsat_s034.g0090.t1
Lsat_s034.g0091.t1IONOTROPIC GLUTAMATE RECEPTOR
Lsat_s034.g0092.t1MSF1/PX19 RELATED
Lsat_s034.g0093.t1DNA POLYMERASE I
Lsat_s034.g0094.t1
Lsat_s034.g0095.t1
Lsat_s034.g0096.t1NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE
Lsat_s034.g0097.t1NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE
Lsat_s034.g0098.t1NOP14
Lsat_s034.g0099.t1
Lsat_s034.g0100.t1
Lsat_s034.g0101.t1
Lsat_s034.g0102.t1-
Lsat_s034.g0103.t1-
Lsat_s034.g0104.t1
Lsat_s034.g0105.t1
Lsat_s034.g0106.t1
Lsat_s034.g0107.t1MICROTUBULE-ASSOCIATED PROTEIN 9
Lsat_s034.g0108.t1ZINC FINGER PROTEIN
Lsat_s034.g0109.t1RING ZINC FINGER PROTEIN
Lsat_s034.g0110.t1INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN-RELATED
Lsat_s034.g0111.t1
Lsat_s034.g0112.t1PROTEIN CBG18546
Lsat_s034.g0113.t15-HYDROXYTRYPTAMINE RECEPTOR
Lsat_s034.g0114.t1
Lsat_s034.g0115.t1
Lsat_s034.g0116.t1HOMEOBOX PROTEIN HMX
Lsat_s034.g0117.t1
Lsat_s034.g0118.t1
Lsat_s034.g0119.t1
Lsat_s034.g0120.t1HOMEOBOX PROTEIN HMX
Lsat_s034.g0121.t1
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