Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s033.g0200.t1 | TESTIS-EXPRESSED PROTEIN 47 |
| Lsat_s033.g0201.t1 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S30/P52 PRO-APOTOTIC PROTEIN |
| Lsat_s033.g0202.t1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| Lsat_s033.g0203.t1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| Lsat_s033.g0204.t1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| Lsat_s033.g0205.t1 | HEPARAN SULFATE SULFOTRANSFERASE |
| Lsat_s033.g0206.t1 | BRAIN-SPECIFIC ANGIOGENESIS INHIBITOR 1-ASSOCIATED PROTEIN 2 |
| Lsat_s033.g0207.t1 | |
| Lsat_s033.g0208.t1 | |
| Lsat_s033.g0209.t1 | ACROSIN-RELATED |
| Lsat_s033.g0210.t1 | LD44762P |
| Lsat_s033.g0211.t1 | |
| Lsat_s033.g0212.t1 | |
| Lsat_s033.g0213.t1 | RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER |
| Lsat_s033.g0214.t1 | ENDONUCLEASE III-LIKE PROTEIN 1 |
| Lsat_s033.g0215.t1 | |
| Lsat_s033.g0216.t1 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Lsat_s033.g0217.t1 | |
| Lsat_s033.g0218.t1 | |
| Lsat_s033.g0219.t1 | METHYLTRANSFERASE, FKBM FAMILY PROTEIN |
| Lsat_s033.g0220.t1 | |
| Lsat_s033.g0221.t1 | PROTEIN FAM220A |
| Lsat_s033.g0222.t1 | FOLATE RECEPTOR |
| Lsat_s033.g0223.t1 | ADIPOR/PROGESTIN RECEPTOR-RELATED |
| Lsat_s033.g0224.t1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| Lsat_s033.g0225.t1 | SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 |
| Lsat_s033.g0226.t1 | |
| Lsat_s033.g0227.t1 | SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 |
| Lsat_s033.g0228.t1 | GERANYLGERANYL PYROPHOSPHATE SYNTHASE |
| Lsat_s033.g0229.t1 | |
| Lsat_s033.g0230.t1 | |
| Lsat_s033.g0231.t1 | |
| Lsat_s033.g0232.t1 | |
| Lsat_s033.g0233.t1 | METABOTROPIC GLUTAMATE RECEPTOR |
| Lsat_s033.g0234.t1 | METABOTROPIC GLUTAMATE RECEPTOR |
| Lsat_s033.g0235.t1 | |
| Lsat_s033.g0236.t1 | |
| Lsat_s033.g0237.t1 | LEUCINE-RICH REPEAT-CONTAINING |
| Lsat_s033.g0238.t1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 57 |
| Lsat_s033.g0239.t1 | ATP-DEPENDENT RNA HELICASE DBP3 |
| Lsat_s033.g0240.t1 | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| Lsat_s033.g0241.t1 | |
| Lsat_s033.g0242.t1 | |
| Lsat_s033.g0243.t1 | DISKS LARGE HOMOLOG 5 |
| Lsat_s033.g0244.t1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| Lsat_s033.g0245.t1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| Lsat_s033.g0246.t1 | NUCLEOREDOXIN |
| Lsat_s033.g0247.t1 | METABOTROPIC GLUTAMATE RECEPTOR |
| Lsat_s033.g0248.t1 | METABOTROPIC GLUTAMATE RECEPTOR |
| Lsat_s033.g0249.t1 | METABOTROPIC GLUTAMATE RECEPTOR |
