About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s033.g0300.t1XYLOSYLTRANSFERASE OXT
Lsat_s033.g0301.t1PROTEIN HEATR9
Lsat_s033.g0302.t140S RIBOSOMAL PROTEIN S15A
Lsat_s033.g0303.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED
Lsat_s033.g0304.t1SYNAPTOTAGMIN
Lsat_s033.g0305.t1
Lsat_s033.g0306.t1CADHERIN-23
Lsat_s033.g0307.t1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Lsat_s033.g0308.t1
Lsat_s033.g0309.t1CADHERIN DOMAIN-CONTAINING PROTEIN
Lsat_s033.g0310.t1
Lsat_s033.g0311.t1
Lsat_s033.g0312.t1
Lsat_s033.g0313.t1
Lsat_s033.g0314.t1
Lsat_s033.g0315.t1
Lsat_s033.g0316.t1CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE
Lsat_s033.g0317.t1DPY30-RELATED
Lsat_s033.g0318.t1GENE, 17359-RELATED
Lsat_s033.g0319.t1DEATH DOMAIN-CONTAINING PROTEIN CRADD
Lsat_s033.g0320.t1ANNEXIN
Lsat_s033.g0321.t1ANNEXIN
Lsat_s033.g0322.t1
Lsat_s033.g0323.t1DUAL SPECIFICITY PROTEIN PHOSPHATASE
Lsat_s033.g0324.t1PEPTIDE CHAIN RELEASE FACTOR
Lsat_s033.g0325.t1GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2
Lsat_s033.g0326.t1ER LUMEN PROTEIN RETAINING RECEPTOR
Lsat_s033.g0327.t1
Lsat_s033.g0328.t1
Lsat_s034.g0001.t1
Lsat_s034.g0002.t1
Lsat_s034.g0003.t1AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE
Lsat_s034.g0004.t1PROTEIN TAG-278-RELATED
Lsat_s034.g0005.t1G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE
Lsat_s034.g0006.t1
Lsat_s034.g0007.t1CTCL TUMOR ANTIGEN HD-CL-01
Lsat_s034.g0008.t1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Lsat_s034.g0009.t1TRANSMEMBRANE PROTEIN 127
Lsat_s034.g0010.t1
Lsat_s034.g0011.t1MEDIATOR COMPLEX SUBUNIT 28
Lsat_s034.g0012.t1
Lsat_s034.g0013.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s034.g0014.t1
Lsat_s034.g0015.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s034.g0016.t1
Lsat_s034.g0017.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s034.g0018.t1
Lsat_s034.g0019.t1
Lsat_s034.g0020.t1ATP-BINDING CASSETTE SUB-FAMILY C
Lsat_s034.g0021.t1
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