About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s033.g0100.t1RNA AND EXPORT FACTOR BINDING PROTEIN
Lsat_s033.g0101.t1SGT1 PROTEIN HSGT1 SUPPRESSOR OF GCR2
Lsat_s033.g0102.t1LATE ENDOSOMAL/LYSOSOMAL MP1 INTERACTING PROTEIN
Lsat_s033.g0103.t1
Lsat_s033.g0104.t1
Lsat_s033.g0105.t1
Lsat_s033.g0106.t1
Lsat_s033.g0107.t1SOLUTE CARRIER FAMILY 39
Lsat_s033.g0108.t1ARYLSULFATASE
Lsat_s033.g0109.t1
Lsat_s033.g0110.t1LD22376P
Lsat_s033.g0111.t1
Lsat_s033.g0112.t12-OXOGLUTARATE DEHYDROGENASE
Lsat_s033.g0113.t1HEMOGEN
Lsat_s033.g0114.t12-OXOGLUTARATE DEHYDROGENASE
Lsat_s033.g0115.t1
Lsat_s033.g0116.t12-OXOGLUTARATE DEHYDROGENASE
Lsat_s033.g0117.t1UPF0728 PROTEIN C10ORF53
Lsat_s033.g0118.t1KETIMINE REDUCTASE MU-CRYSTALLIN
Lsat_s033.g0119.t1S-ADENOSYLMETHIONINE SYNTHETASE
Lsat_s033.g0120.t1S-ADENOSYLMETHIONINE SYNTHETASE
Lsat_s033.g0121.t1FAS-ASSOCIATED PROTEIN
Lsat_s033.g0122.t1PROTEIN CBG12054-RELATED
Lsat_s033.g0123.t1
Lsat_s033.g0124.t1
Lsat_s033.g0125.t1PROTEIN CBG12054-RELATED
Lsat_s033.g0126.t1
Lsat_s033.g0127.t1
Lsat_s033.g0128.t1
Lsat_s033.g0129.t1
Lsat_s033.g0130.t1
Lsat_s033.g0131.t1GLUTAMINE SYNTHETASE
Lsat_s033.g0132.t1C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED
Lsat_s033.g0133.t1
Lsat_s033.g0134.t1ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL
Lsat_s033.g0135.t1
Lsat_s033.g0136.t1-
Lsat_s033.g0137.t1
Lsat_s033.g0138.t1
Lsat_s033.g0139.t1
Lsat_s033.g0140.t1
Lsat_s033.g0141.t1
Lsat_s033.g0142.t1
Lsat_s033.g0143.t1
Lsat_s033.g0144.t1LEUCOKININ RECEPTOR-RELATED
Lsat_s033.g0145.t1
Lsat_s033.g0146.t1TYROSINE-PROTEIN KINASE RECEPTOR
Lsat_s033.g0147.t1PROTEIN KINASE C, MU
Lsat_s033.g0148.t1-
Lsat_s033.g0149.t1SERINE/THREONINE-PROTEIN KINASE
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