About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s032.g0072.t1
Lsat_s032.g0073.t1UNCHARACTERIZED
Lsat_s032.g0074.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Lsat_s032.g0075.t1CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26
Lsat_s032.g0076.t1
Lsat_s032.g0077.t1
Lsat_s032.g0078.t1VOLTAGE-GATED POTASSIUM CHANNEL
Lsat_s032.g0079.t1
Lsat_s032.g0080.t1UNCHARACTERIZED
Lsat_s032.g0081.t1KINESIN-LIKE PROTEIN KLP-3
Lsat_s032.g0082.t1FRUCTOSE-1,6-BISPHOSPHATASE-RELATED
Lsat_s032.g0083.t1F-BOX ONLY PROTEIN 33
Lsat_s032.g0084.t1
Lsat_s032.g0085.t1
Lsat_s032.g0086.t1TROPOMYOSIN
Lsat_s032.g0087.t1SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
Lsat_s032.g0088.t1TYROSINE-PROTEIN KINASE HOPSCOTCH
Lsat_s032.g0089.t1SODIUM/POTASSIUM/CALCIUM EXCHANGER
Lsat_s032.g0090.t1
Lsat_s032.g0091.t1
Lsat_s032.g0092.t1
Lsat_s032.g0093.t1UNCHARACTERIZED
Lsat_s032.g0094.t1UNCHARACTERIZED
Lsat_s032.g0095.t1TRANSCRIPTIONAL REPRESSOR P66-RELATED
Lsat_s032.g0096.t1HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
Lsat_s032.g0097.t1UNCHARACTERIZED
Lsat_s032.g0098.t1C1ORF189
Lsat_s032.g0099.t1SEMAPHORIN
Lsat_s032.g0100.t1
Lsat_s032.g0101.t1
Lsat_s032.g0102.t1
Lsat_s032.g0103.t1ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
Lsat_s032.g0104.t1ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
Lsat_s032.g0105.t1ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
Lsat_s032.g0106.t1MUCIN 4-RELATED
Lsat_s032.g0107.t1PROTEIN B, PUTATIVE-RELATED-RELATED
Lsat_s032.g0108.t1
Lsat_s032.g0109.t1
Lsat_s032.g0110.t1SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Lsat_s032.g0111.t1
Lsat_s032.g0112.t1
Lsat_s032.g0113.t1
Lsat_s032.g0114.t1
Lsat_s032.g0115.t1
Lsat_s032.g0116.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s032.g0117.t1POLYCYSTIN FAMILY MEMBER
Lsat_s032.g0118.t1DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Lsat_s032.g0119.t1ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
Lsat_s032.g0120.t1
Lsat_s032.g0121.t1ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
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