About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s031.g0240.t1UNCHARACTERIZED
Lsat_s031.g0241.t1
Lsat_s031.g0242.t1E3 UBIQUITIN-PROTEIN LIGASE KCMF1
Lsat_s031.g0243.t1LIG_CHAN-GLU_BD DOMAIN-CONTAINING PROTEIN
Lsat_s031.g0244.t1BASIC LEUCINE ZIPPER NUCLEAR FACTOR 1 BLZF1 PROTEIN
Lsat_s031.g0245.t1NUCLEOSIDE DIPHOSPHATE KINASE 7
Lsat_s031.g0246.t1RAS-RELATED PROTEIN RAB
Lsat_s031.g0247.t1DUF853 DOMAIN-CONTAINING PROTEIN
Lsat_s031.g0248.t1
Lsat_s031.g0249.t1
Lsat_s031.g0250.t1
Lsat_s031.g0251.t1
Lsat_s031.g0252.t1
Lsat_s031.g0253.t1
Lsat_s031.g0254.t1
Lsat_s031.g0255.t1
Lsat_s031.g0256.t1ADHESION G-PROTEIN COUPLED RECEPTOR
Lsat_s031.g0257.t1UNCHARACTERIZED
Lsat_s031.g0258.t1G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN
Lsat_s031.g0259.t1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG
Lsat_s031.g0260.t1BETA-1,4-GALACTOSYLTRANSFERASE
Lsat_s031.g0261.t1
Lsat_s031.g0262.t1
Lsat_s031.g0263.t1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Lsat_s031.g0264.t1CADHERIN-23
Lsat_s031.g0265.t1CALPONIN
Lsat_s031.g0266.t1
Lsat_s031.g0267.t1
Lsat_s031.g0268.t1CADHERIN-23
Lsat_s031.g0269.t1CALPONIN
Lsat_s031.g0270.t1MALIC ENZYME-RELATED
Lsat_s031.g0271.t1MALIC ENZYME-RELATED
Lsat_s031.g0272.t1
Lsat_s031.g0273.t1WASP-1
Lsat_s031.g0274.t1PRE-MRNA-PROCESSING FACTOR 17
Lsat_s031.g0275.t1TRANSPORTIN 3 AND IMPORTIN 13
Lsat_s031.g0276.t1
Lsat_s031.g0277.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s031.g0278.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s031.g0279.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s031.g0280.t1TRANSPORTIN 3 AND IMPORTIN 13
Lsat_s031.g0281.t1TOLL-INTERACTING PROTEIN
Lsat_s031.g0282.t1
Lsat_s031.g0283.t1
Lsat_s031.g0284.t1GUANYLYL CYCLASE
Lsat_s031.g0285.t1
Lsat_s031.g0286.t1
Lsat_s031.g0287.t1
Lsat_s031.g0288.t1ZINC FINGER PROTEIN
Lsat_s031.g0289.t1
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