About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s031.g0140.t1
Lsat_s031.g0141.t1
Lsat_s031.g0142.t1
Lsat_s031.g0143.t1SOLUTE CARRIER FAMILY 40 MEMBER
Lsat_s031.g0144.t1
Lsat_s031.g0145.t1SOLUTE CARRIER FAMILY 40 MEMBER
Lsat_s031.g0146.t1
Lsat_s031.g0147.t1SOLUTE CARRIER FAMILY 40 MEMBER
Lsat_s031.g0148.t1
Lsat_s031.g0149.t1
Lsat_s031.g0150.t1SLL0310 PROTEIN
Lsat_s031.g0151.t1
Lsat_s031.g0152.t1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
Lsat_s031.g0153.t1
Lsat_s031.g0154.t1
Lsat_s031.g0155.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
Lsat_s031.g0156.t1-
Lsat_s031.g0157.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
Lsat_s031.g0158.t1HOMOGENTISATE 1,2-DIOXYGENASE
Lsat_s031.g0159.t1U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14
Lsat_s031.g0160.t1POLYPHOSPHOINOSITIDE PHOSPHATASE
Lsat_s031.g0161.t1HL07962P-RELATED
Lsat_s031.g0162.t1BETA-1,4-GALACTOSYLTRANSFERASE
Lsat_s031.g0163.t1BETA-1,4-GALACTOSYLTRANSFERASE
Lsat_s031.g0164.t1BETA-1,4-GALACTOSYLTRANSFERASE
Lsat_s031.g0165.t1GEO07735P1-RELATED-RELATED
Lsat_s031.g0166.t1EBNA2 BINDING PROTEIN P100
Lsat_s031.g0167.t1METHYLOSOME PROTEIN 50
Lsat_s031.g0168.t1
Lsat_s031.g0169.t1TRANSCRIPTION FACTOR E2F
Lsat_s031.g0170.t1STEERIN
Lsat_s031.g0171.t150S RIBOSOMAL PROTEIN L21
Lsat_s031.g0172.t1CARBON CATABOLITE REPRESSOR PROTEIN 4
Lsat_s031.g0173.t1SPINAL CORD EXPRESSION PROTEIN 4
Lsat_s031.g0174.t1LANC-LIKE PROTEIN
Lsat_s031.g0175.t1UBIQUITIN THIOESTERASE
Lsat_s031.g0176.t1
Lsat_s031.g0177.t1
Lsat_s031.g0178.t1
Lsat_s031.g0179.t1
Lsat_s031.g0180.t1
Lsat_s031.g0181.t1
Lsat_s031.g0182.t1
Lsat_s031.g0183.t1
Lsat_s031.g0184.t1
Lsat_s031.g0185.t1
Lsat_s031.g0186.t1
Lsat_s031.g0187.t1
Lsat_s031.g0188.t1
Lsat_s031.g0189.t1
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