Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s031.g0090.t1 | |
Lsat_s031.g0091.t1 | ANDROGLOBIN |
Lsat_s031.g0092.t1 | HELICASE |
Lsat_s031.g0093.t1 | |
Lsat_s031.g0094.t1 | |
Lsat_s031.g0095.t1 | |
Lsat_s031.g0096.t1 | |
Lsat_s031.g0097.t1 | |
Lsat_s031.g0098.t1 | HISTIDINE-RICH GLYCOPROTEIN |
Lsat_s031.g0099.t1 | |
Lsat_s031.g0100.t1 | |
Lsat_s031.g0101.t1 | BLR2807 PROTEIN |
Lsat_s031.g0102.t1 | CELL DIVISION CYCLE 5-LIKE PROTEIN |
Lsat_s031.g0103.t1 | E3 UBIQUITIN-PROTEIN LIGASE ATL42 |
Lsat_s031.g0104.t1 | NUCLEOPORIN NUP43 |
Lsat_s031.g0105.t1 | |
Lsat_s031.g0106.t1 | MOLTING PROTEIN MLT-4 |
Lsat_s031.g0107.t1 | TAIL-ANCHORED PROTEIN INSERTION RECEPTOR WRB |
Lsat_s031.g0108.t1 | C21ORF13-RELATED |
Lsat_s031.g0109.t1 | SH3 DOMAIN-BINDING GLUTAMIC ACID-RICH-LIKE PROTEIN |
Lsat_s031.g0110.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s031.g0111.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s031.g0112.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s031.g0113.t1 | |
Lsat_s031.g0114.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s031.g0115.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s031.g0116.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s031.g0117.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s031.g0118.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s031.g0119.t1 | |
Lsat_s031.g0120.t1 | GLUTATHIONYL-HYDROQUINONE REDUCTASE |
Lsat_s031.g0121.t1 | GLUTATHIONYL-HYDROQUINONE REDUCTASE |
Lsat_s031.g0122.t1 | |
Lsat_s031.g0123.t1 | RAS-LIKE FAMILY MEMBER 11 |
Lsat_s031.g0124.t1 | SIALATE O-ACETYLESTERASE |
Lsat_s031.g0125.t1 | SIALATE O-ACETYLESTERASE |
Lsat_s031.g0126.t1 | LIM DOMAIN-CONTAINING PROTEIN |
Lsat_s031.g0127.t1 | |
Lsat_s031.g0128.t1 | PROTEIN AD-016-RELATED |
Lsat_s031.g0129.t1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER |
Lsat_s031.g0130.t1 | PROTEASE M50 MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE 2 PROTEASE |
Lsat_s031.g0131.t1 | |
Lsat_s031.g0132.t1 | COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN |
Lsat_s031.g0133.t1 | |
Lsat_s031.g0134.t1 | |
Lsat_s031.g0135.t1 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM A |
Lsat_s031.g0136.t1 | EH DOMAIN |
Lsat_s031.g0137.t1 | GAF/PUTATIVE CYTOSKELETAL PROTEIN |
Lsat_s031.g0138.t1 | |
Lsat_s031.g0139.t1 |